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Protein Alignment CG8560 and Cpb2

DIOPT Version :9

Sequence 1:	NP_001261516.1	Gene:	CG8560 / 38830	FlyBaseID:	FBgn0035781	Length:	418	Species:	Drosophila melanogaster
Sequence 2:	NP_062749.2	Gene:	Cpb2 / 56373	MGIID:	1891837	Length:	422	Species:	Mus musculus

Alignment Length:	416	Identity:	121/416 - (29%)
Similarity:	203/416 - (48%)	Gaps:	51/416 - (12%)

- Green bases have known domain annotations that are detailed below.

  Fly     2 LKLFAVVLLLASVALAVENYDGY-----KIYDINARNAFEKQLLLRLSGNEAY----------DF 51
            :||..:.:|   ||:.:....|:     ::.....|.:.:.|||..|:  ..|          :|
Mouse     1 MKLHGLGIL---VAIILYEQHGFAFQSGQVLSALPRTSRQVQLLQNLT--TTYEVVLWQPVTAEF 60

  Fly    52 FDLPRSLDASSRVMVKPEDQEGFEHLLEKYGVNYSVINENFGESLRQERDENQNQRLMNLRSAER 116
            .:..:.:    ...|...|.:..:..|....:.::|:..|..:.:.|       |...:..|...
Mouse    61 IEKKKEV----HFFVNASDVDSVKAHLNVSRIPFNVLMNNVEDLIEQ-------QTFNDTVSPRA 114

  Fly   117 SVS-FKAFHRHAEINAYLDELAAAYPSRVSVQVAGKSYENRDIKTITITNGDGKTGKNVVFLDAG 180
            |.| ::.:|...||.::::.:...:|..:.....|.|:|...:..:.: :|..:..||.:::|.|
Mouse   115 SASYYEQYHSLNEIYSWIEVITEQHPDMLQKIYIGSSFEKYPLYVLKV-SGKEQRIKNAIWIDCG 178

  Fly   181 IHAREWIAHAGALYVIHQLV-----ENFAANSELLKDFDWVILPVVNPDGYEYSHTTTRMWRKTR 240
            |||||||:.|..|:.|..:.     ||.  .:.||:..|:.|:||:|.|||:|:....|||||.|
Mouse   179 IHAREWISPAFCLWFIGYVTQFHGKENL--YTRLLRHVDFYIMPVMNVDGYDYTWKKNRMWRKNR 241

  Fly   241 KP-ISSACYGTDANRNF-DFHWGEVGASSYSCSDTFKGETAFSEPETQLIRDILLSLTGRGKFYL 303
            .. .::.|.|||.|||| ..||.|.||||.|||:|:.|....||||.:.:.|.|.......|.|:
Mouse   242 SAHKNNRCVGTDLNRNFASKHWCEKGASSSSCSETYCGLYPESEPEVKAVADFLRRNIDHIKAYI 306

  Fly   304 TLHSYGNYLLYPWGWTSALPSSWRDNDEVAQGGADAIKSA----TGTKYTVGSSTNVLYAAAGGS 364
            ::|||...:|:|:.:..   |..:|::|::...::|:::.    ..|:||.||.:..||.|.|||
Mouse   307 SMHSYSQQILFPYSYNR---SKSKDHEELSLVASEAVRAIESINKNTRYTHGSGSESLYLAPGGS 368

  Fly   365 DDYAFGVANFPVSITMEL-PAGGTGF 389
            ||:.:.: ....|.|:|| ..|..||
Mouse   369 DDWIYDL-GIKYSFTIELRDTGRYGF 393

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.