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Protein Alignment CG8560 and Cpa2

DIOPT Version :9

Sequence 1:	NP_001261516.1	Gene:	CG8560 / 38830	FlyBaseID:	FBgn0035781	Length:	418	Species:	Drosophila melanogaster
Sequence 2:	NP_001019869.1	Gene:	Cpa2 / 232680	MGIID:	3617840	Length:	417	Species:	Mus musculus

Alignment Length:	425	Identity:	153/425 - (36%)
Similarity:	225/425 - (52%)	Gaps:	21/425 - (4%)

- Green bases have known domain annotations that are detailed below.

  Fly     2 LKLFAVVLLLASVALAVENYDGYKIYDINARNAFEKQLLLRLSGNE--AYDFFDLPRSLDASSRV 64
            ::|..:::.|.......|.:.|.::.::...:..:.:.||:|...|  ..||:..|.....:..|
Mouse     1 MRLTPLLVALFGYIYCQETFVGDQVLEVIPNDEEQIKTLLQLEAEEHLELDFWKSPSVPRQTVHV 65

  Fly    65 MVKPEDQEGFEHLLEKYGVNYSVINENFGESLRQERDENQNQRLMNLRSAERSVSFK--AFHRHA 127
            .|.....:..:..||..|:.||::.|:....|.|||:|    .|.| :..||..:|.  |:|...
Mouse    66 RVPFASIQDVKVFLESQGITYSIMIEDVQVLLDQEREE----MLFN-QQRERGTNFNFGAYHTLE 125

  Fly   128 EINAYLDELAAAYPSRVSVQVAGKSYENRDIKTITI-TNGDGKTGKNVVFLDAGIHAREWIAHAG 191
            ||...:|.|.|..|..||....|.|:|||.:..:.. |.||    |..::||||||||||:..|.
Mouse   126 EIYQEMDNLVAENPGLVSKVNIGSSFENRPMNVLKFSTGGD----KPAIWLDAGIHAREWVTQAT 186

  Fly   192 ALYVIHQLVENFA---ANSELLKDFDWVILPVVNPDGYEYSHTTTRMWRKTR-KPISSACYGTDA 252
            ||:..:::..::.   |.:.||...|..:|||.|||||.:|.|:.||||||| |...|.|.|.|.
Mouse   187 ALWTANKIASDYGTDPAITSLLNTLDVFLLPVTNPDGYVFSQTSNRMWRKTRSKRSGSFCVGVDP 251

  Fly   253 NRNFDFHWGEVGASSYSCSDTFKGETAFSEPETQLIRDILLSLTGRGKFYLTLHSYGNYLLYPWG 317
            |||:|.::|..||||..|||::.|.:..||.|.:.|.|.:.| .|:.|.::|||||...|::|:|
Mouse   252 NRNWDANFGGPGASSNPCSDSYHGPSPNSEVEVKSIVDFIKS-HGKVKAFITLHSYSQLLMFPYG 315

  Fly   318 WTSALPSSWRDNDEVAQGGADAIKSATGTKYTVGSSTNVLYAAAGGSDDYAFGVANFPVSITMEL 382
            :..|.|..:.:.|||||..|.::|...||.|.||...:|:|.|:|||.|:|:.: ....|...||
Mouse   316 YKCAKPDDFNELDEVAQRAAQSLKRLHGTSYKVGPICSVIYQASGGSIDWAYDL-GIKYSFAFEL 379

  Fly   383 -PAGGTGFNPSTSQIEGFVSETWVGIKAMAQKVAD 416
             ..|..||.....||.....|||:|:|.:.:.|.|
Mouse   380 RDTGYYGFLLPAKQILPTAEETWLGLKTIMEHVRD 414

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.