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Protein Alignment CG8560 and Cpa1

DIOPT Version :9

Sequence 1:	NP_001261516.1	Gene:	CG8560 / 38830	FlyBaseID:	FBgn0035781	Length:	418	Species:	Drosophila melanogaster
Sequence 2:	NP_079626.2	Gene:	Cpa1 / 109697	MGIID:	88478	Length:	419	Species:	Mus musculus

Alignment Length:	415	Identity:	129/415 - (31%)
Similarity:	211/415 - (50%)	Gaps:	16/415 - (3%)

- Green bases have known domain annotations that are detailed below.

  Fly     1 MLKLFAVVLLLASVALAVENYDGYKIYDINARNAFEKQLLLRLSGNE--AYDFFDLPRSLDASSR 63
            |.:|..:.:|||:| ...||:.|:::..|:|.:..:.|.:..|...|  ..||:..|........
Mouse     1 MKRLLVLSVLLAAV-FGNENFVGHQVLRISATDEAQVQKVRELEELEHLKLDFWRDPARAGLPID 64

  Fly    64 VMVKPEDQEGFEHLLEKYGVNYSVINENFGESLRQERDENQNQRLMNLRS-AERSVSFKAFHRHA 127
            |.|.....:..:..||.:.::|.::.|:. :||..|  |.|.......|: :..:.::..:|...
Mouse    65 VRVPFPTIQSVKAFLEYHDISYEIMIEDV-QSLLDE--EKQQMSAFQARALSTDAFNYATYHTLD 126

  Fly   128 EINAYLDELAAAYPSRVSVQVAGKSYENRDIKTITITNGDGKTGKNVVFLDAGIHAREWIAHAGA 192
            ||..::|.|...:|..||....|.::|.|.|..:..:.|.  |.:..:::|.|||:|||:..|..
Mouse   127 EIYEFMDLLVTEHPQLVSKIQIGSTFEGRPINVLKFSTGG--TNRPAIWIDTGIHSREWVTQASG 189

  Fly   193 LYVIHQLVENFAAN---SELLKDFDWVILPVVNPDGYEYSHTTTRMWRKTRKPI-SSACYGTDAN 253
            ::...::.:::...   :.:|.:.|..:..|.||||:.|:|.|.|||||||... .|.|.|.|.|
Mouse   190 VWFAKKITKDYGQEPTLTAILDNMDIFLEIVTNPDGFVYTHKTNRMWRKTRSHTEGSLCVGVDPN 254

  Fly   254 RNFDFHWGEVGASSYSCSDTFKGETAFSEPETQLIRDILLSLTGRGKFYLTLHSYGNYLLYPWGW 318
            ||:|..:|..||||..||:|::|:...||.|.:.|.|.:.| .|..|.::::|||...||||:|:
Mouse   255 RNWDAAFGMPGASSNPCSETYRGKFPNSEVEVKSIVDFVTS-HGNIKAFISIHSYSQLLLYPYGY 318

  Fly   319 TSALPSSWRDNDEVAQGGADAIKSATGTKYTVGSSTNVLYAAAGGSDDYAFGVANFPVSITMEL- 382
            ||.......:.|::|:....|:.|..|||:..||..:.:|.|:|.:.|:.:. .....|.|.||
Mouse   319 TSEPAPDKEELDQLAKSAVTALTSLHGTKFKYGSIIDTIYQASGSTIDWTYS-QGIKYSFTFELR 382

  Fly   383 PAGGTGFNPSTSQIEGFVSETWVGI 407
            ..|..||....|||.....|||:.:
Mouse   383 DTGLRGFLLPASQIIPTAEETWLAL 407

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.