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Protein Alignment CG18417 and Cpa5

DIOPT Version :9

Sequence 1:	NP_648119.1	Gene:	CG18417 / 38829	FlyBaseID:	FBgn0035780	Length:	427	Species:	Drosophila melanogaster
Sequence 2:	NP_653120.1	Gene:	Cpa5 / 74649	MGIID:	1921899	Length:	436	Species:	Mus musculus

Alignment Length:	416	Identity:	120/416 - (28%)
Similarity:	196/416 - (47%)	Gaps:	57/416 - (13%)

- Green bases have known domain annotations that are detailed below.

  Fly    44 EALSELVKNASYYEVFSELNAGNPGKI--------------MVHPHEQVNFVQ-LMEENNVKYDI 93
            :.|..|.||.....:..:|....|.|:              |..|..::..|: .::.:.:.|.|
Mouse    41 QVLRVLAKNEKQLSLLRDLETQKPQKVDFWRGPARPSLPVDMRVPFSELPSVKAYLKSHGLAYSI 105

  Fly    94 INRNVGLTL---------SRQFE--TNRMLRHWFPYNGRLGTERYYNHEEINQFIEDLAGEHPRR 147
            :.:::.:.|         ||:.|  ||.     |.|:.      |:..:||..:|::...||...
Mouse   106 MIKDIQVLLDEERDAMAKSRRLERSTNS-----FSYSS------YHTLDEIYSWIDNFVAEHSNL 159

  Fly   148 VFLKTVGRSYEGRWLKTITITNGDARRNKNVILVDGGFHAREWISPAAATYLINQLV--YNLEDN 210
            |....:|:|:|.|.:..:..:.|..  |:..|.:|.|.|:||||:.|...::..::|  |..:..
Mouse   160 VSKIHIGKSFENRSILVLKFSTGGP--NRPAIWIDTGIHSREWITHATGIWISQKIVNAYGKDHV 222

  Fly   211 ADLLLD-FDWVILPVVNPDGYEYTQLSEDTRMWRKTRKPSSSD---CIGTDPNRNFDFHWNEEGA 271
            ...:|: .|..|..|.||||:.:|.  ...|:|||.:  ||..   |||.|.|||:...:...|:
Mouse   223 LKRILNTMDIFIEIVTNPDGFAFTH--SMNRLWRKNK--SSQPGIFCIGVDLNRNWKAGFGGNGS 283

  Fly   272 SDDPCDNIYAGAKPFSEPEALVVGDLIHSYVDRGQMYLTLHSYGSLILYPWGWTAAVPDTEEDLH 336
            :.:||...|.|..|.||||...:.|.|..:.:...| :::|||..:::||:|.:.......|:|.
Mouse   284 NKNPCSETYRGPAPESEPEVAAIVDFITGHGNFKAM-ISIHSYSQMVMYPYGHSLEPVPNHEELF 347

  Fly   337 EVAAAGQSAIQEATGTIYKIGPSATTINYAASGASDDYAFNAGFPISFTMEL-PFGGTGFDPPAS 400
            .:|.....|:.:..|..|..|..:||: |:|||.|.|:|:::|...:|:.|| ..|..||..|||
Mouse   348 NLAKDAVKALNKVHGIQYIFGSISTTL-YSASGISVDWAYDSGIKYAFSFELRDTGQYGFLLPAS 411

  Fly   401 DIDSIVKETWVGIAAMARKVIQKYPL 426
            .|....:|||     ||.:.|.|:.|
Mouse   412 QIVPTAEETW-----MALQTIMKHTL 432

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.