DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18417 and Agtpbp1

DIOPT Version :10

Sequence 1:NP_648119.1 Gene:CG18417 / 38829 FlyBaseID:FBgn0035780 Length:427 Species:Drosophila melanogaster
Sequence 2:NP_001099570.1 Gene:Agtpbp1 / 290986 RGDID:1306307 Length:1219 Species:Rattus norvegicus


Alignment Length:287 Identity:52/287 - (18%)
Similarity:87/287 - (30%) Gaps:110/287 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 TNKYEGYKIYEVSSEARSVAFSEALSELVKNAS---------YYEVFSELNA------------- 64
            :|.|..:..:|||.....||:...:....|:.|         .|.|...|||             
  Rat   735 SNHYHQWFYFEVSGMRPGVAYRFNIINCEKSNSQFNYGMQPLMYSVQEALNARPWWIRMGTDICY 799

  Fly    65 -------------GNPGK-------IMVHPHEQVNFVQLMEENNVKYDIINRNVGLTLSRQFETN 109
                         |..||       .:|.||              |.|:.               
  Rat   800 YKNHFSRSSVAAGGQKGKSYYTITFTVVFPH--------------KDDVC--------------- 835

  Fly   110 RMLRHWFPYNGRLGTERY-YNHEEINQFIEDLAGEH-PRRVFLK--TVGRSYEGRWLKTITITNG 170
                 :|.|:       | |.:..:...::.|...| |::::.:  .:..:..|.....:|||..
  Rat   836 -----YFAYH-------YPYTYSTLQMHLQKLESAHNPQQIYFRKDVLCETLSGNSCPLVTITAM 888

  Fly   171 DAR---------RNKNVILVDGGFHARE----WISPAAATYLINQLVYNLEDNADLLLDFDWVIL 222
            ...         |.:..|.:....|..|    |:......||::    |......|...:.:.|:
  Rat   889 PESSYYEHICQFRTRPYIFLSARVHPGETNASWVMKGTLEYLMS----NSPTAQSLREAYIFKIV 949

  Fly   223 PVVNPDG-----YEYTQLSED-TRMWR 243
            |::||||     :..:...|| .|.|:
  Rat   950 PMLNPDGVINGNHRCSLSGEDLNRQWQ 976

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18417NP_648119.1 Propep_M14 <70..105 CDD:460505 5/34 (15%)
Peptidase_M14 133..412 CDD:459730 26/133 (20%)
Agtpbp1NP_001099570.1 Pepdidase_M14_N 705..839 CDD:407865 23/137 (17%)
M14_Nna1 862..1132 CDD:349477 23/119 (19%)

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