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Protein Alignment CG18417 and Cpa2

DIOPT Version :9

Sequence 1:	NP_648119.1	Gene:	CG18417 / 38829	FlyBaseID:	FBgn0035780	Length:	427	Species:	Drosophila melanogaster
Sequence 2:	NP_001019869.1	Gene:	Cpa2 / 232680	MGIID:	3617840	Length:	417	Species:	Mus musculus

Alignment Length:	361	Identity:	131/361 - (36%)
Similarity:	191/361 - (52%)	Gaps:	27/361 - (7%)

- Green bases have known domain annotations that are detailed below.

  Fly    75 HEQVNFVQL------MEENNVKYDIINRNVGLTLSRQFETNRMLRHWFPYNGRLGTE----RYYN 129
            |.:|.|..:      :|...:.|.|:..:|.:.|.:  |...||   |......||.    .|:.
Mouse    64 HVRVPFASIQDVKVFLESQGITYSIMIEDVQVLLDQ--EREEML---FNQQRERGTNFNFGAYHT 123

  Fly   130 HEEINQFIEDLAGEHPRRVFLKTVGRSYEGRWLKTITITNGDARRNKNVILVDGGFHAREWISPA 194
            .|||.|.:::|..|:|..|....:|.|:|.|.:..:..:.|.   :|..|.:|.|.|||||::.|
Mouse   124 LEEIYQEMDNLVAENPGLVSKVNIGSSFENRPMNVLKFSTGG---DKPAIWLDAGIHAREWVTQA 185

  Fly   195 AATYLINQLV--YNLEDNADLLLD-FDWVILPVVNPDGYEYTQLSEDTRMWRKTR-KPSSSDCIG 255
            .|.:..|::.  |..:.....||: .|..:|||.|||||.::|.|  .||||||| |.|.|.|:|
Mouse   186 TALWTANKIASDYGTDPAITSLLNTLDVFLLPVTNPDGYVFSQTS--NRMWRKTRSKRSGSFCVG 248

  Fly   256 TDPNRNFDFHWNEEGASDDPCDNIYAGAKPFSEPEALVVGDLIHSYVDRGQMYLTLHSYGSLILY 320
            .|||||:|.::...|||.:||.:.|.|..|.||.|...:.|.|.|: .:.:.::|||||..|:::
Mouse   249 VDPNRNWDANFGGPGASSNPCSDSYHGPSPNSEVEVKSIVDFIKSH-GKVKAFITLHSYSQLLMF 312

  Fly   321 PWGWTAAVPDTEEDLHEVAAAGQSAIQEATGTIYKIGPSATTINYAASGASDDYAFNAGFPISFT 385
            |:|:..|.||...:|.|||.....:::...||.||:||..:.| |.|||.|.|:|::.|...||.
Mouse   313 PYGYKCAKPDDFNELDEVAQRAAQSLKRLHGTSYKVGPICSVI-YQASGGSIDWAYDLGIKYSFA 376

  Fly   386 MEL-PFGGTGFDPPASDIDSIVKETWVGIAAMARKV 420
            .|| ..|..||..||..|....:|||:|:..:...|
Mouse   377 FELRDTGYYGFLLPAKQILPTAEETWLGLKTIMEHV 412

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.