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Protein Alignment CG8562 and Cpa5

DIOPT Version :9

Sequence 1:	NP_648118.1	Gene:	CG8562 / 38828	FlyBaseID:	FBgn0035779	Length:	424	Species:	Drosophila melanogaster
Sequence 2:	NP_653120.1	Gene:	Cpa5 / 74649	MGIID:	1921899	Length:	436	Species:	Mus musculus

Alignment Length:	427	Identity:	118/427 - (27%)
Similarity:	205/427 - (48%)	Gaps:	29/427 - (6%)

- Green bases have known domain annotations that are detailed below.

  Fly     9 VLFLGATLVAA--EQDYEGYRIYEVIPSTADQADLLHQLSLQGYDFISETRLLGHPSRVI---VS 68
            :||....|..|  :.::.|.::..|:.....|..||..|..|....:...|....||..:   |.
Mouse    21 LLFCNFILAVAWGQVNFTGDQVLRVLAKNEKQLSLLRDLETQKPQKVDFWRGPARPSLPVDMRVP 85

  Fly    69 PAQLKHFQQLVEAEKMTLTLVNSNLGASIAEEFAQRQMQRLLAPITGKGRLSTERYYTHEEIINY 133
            .::|...:..:::..:..:::..::...:.||.......|.|...|..  .|...|:|.:||.::
Mouse    86 FSELPSVKAYLKSHGLAYSIMIKDIQVLLDEERDAMAKSRRLERSTNS--FSYSSYHTLDEIYSW 148

  Fly   134 IDDLAQRFPSRVFVKTVGWSYEQR---VLKTITITNGDGKANKKVIFMDGGFHAREWISPAAVLY 195
            ||:......:.|....:|.|:|.|   |||..|     |..|:..|::|.|.|:||||:.|..::
Mouse   149 IDNFVAEHSNLVSKIHIGKSFENRSILVLKFST-----GGPNRPAIWIDTGIHSREWITHATGIW 208

  Fly   196 VIDQLVEQFEENAHLLK----DYDWVILPLVNADGYEHTQTGTLARMWRKTR--QPYTYAGQTCY 254
            :..::|..:.:: |:||    ..|..|..:.|.||:..|.  ::.|:|||.:  ||    |..|.
Mouse   209 ISQKIVNAYGKD-HVLKRILNTMDIFIEIVTNPDGFAFTH--SMNRLWRKNKSSQP----GIFCI 266

  Fly   255 GADPNRNFDFHWNEEGASSNPCADTYAGPTAFSEPETITVRDLMHSLADRGIMYLTLHSYGNYLL 319
            |.|.|||:...:...|::.|||::||.||...||||...:.|.:....:...| :::|||...::
Mouse   267 GVDLNRNWKAGFGGNGSNKNPCSETYRGPAPESEPEVAAIVDFITGHGNFKAM-ISIHSYSQMVM 330

  Fly   320 YPWGWTSDLPENWEDLDAVARTGAEAIENATGTVYTYGSSTNVLYIAAGASDDYGYYAGFNVSIT 384
            ||:|.:.:...|.|:|..:|:...:|:....|..|.:||.:..||.|:|.|.|:.|.:|...:.:
Mouse   331 YPYGHSLEPVPNHEELFNLAKDAVKALNKVHGIQYIFGSISTTLYSASGISVDWAYDSGIKYAFS 395

  Fly   385 MELPGAGSIGFNPPVTRIDEFVTETWIGIRAMAEKVI 421
            .||...|..||..|.::|.....|||:.::.:.:..:
Mouse   396 FELRDTGQYGFLLPASQIVPTAEETWMALQTIMKHTL 432

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.