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Protein Alignment CG8562 and Cpa2

DIOPT Version :9

Sequence 1:	NP_648118.1	Gene:	CG8562 / 38828	FlyBaseID:	FBgn0035779	Length:	424	Species:	Drosophila melanogaster
Sequence 2:	NP_001019869.1	Gene:	Cpa2 / 232680	MGIID:	3617840	Length:	417	Species:	Mus musculus

Alignment Length:	435	Identity:	134/435 - (30%)
Similarity:	218/435 - (50%)	Gaps:	49/435 - (11%)

- Green bases have known domain annotations that are detailed below.

  Fly     7 LLVLFLGATLVAAEQDYEGYRIYEVIPSTADQADLLHQLSLQGY---DFISETRLLGHPSRVIVS 68
            |||...|  .:..::.:.|.::.||||:..:|...|.||..:.:   ||.....:......|.|.
Mouse     6 LLVALFG--YIYCQETFVGDQVLEVIPNDEEQIKTLLQLEAEEHLELDFWKSPSVPRQTVHVRVP 68

  Fly    69 PAQLKHFQQLVEAEKMTLTLVNSNLGASIAEE-----FAQRQMQRLLAPITGKGRLSTER----- 123
            .|.::..:..:|::.:|.:::..::...:.:|     |.|::                ||
Mouse    69 FASIQDVKVFLESQGITYSIMIEDVQVLLDQEREEMLFNQQR----------------ERGTNFN 117

  Fly   124 ---YYTHEEIINYIDDLAQRFPSRVFVKTVGWSYEQRVLKTITITNGDGKANKKVIFMDGGFHAR 185
               |:|.|||...:|:|....|..|....:|.|:|.|.:..:..:.|   .:|..|::|.|.|||
Mouse   118 FGAYHTLEEIYQEMDNLVAENPGLVSKVNIGSSFENRPMNVLKFSTG---GDKPAIWLDAGIHAR 179

  Fly   186 EWISPAAVLYVIDQLVEQFEEN---AHLLKDYDWVILPLVNADGYEHTQTGTLARMWRKTRQPYT 247
            ||::.|..|:..:::...:..:   ..||...|..:||:.|.|||..:||..  |||||||.  .
Mouse   180 EWVTQATALWTANKIASDYGTDPAITSLLNTLDVFLLPVTNPDGYVFSQTSN--RMWRKTRS--K 240

  Fly   248 YAGQTCYGADPNRNFDFHWNEEGASSNPCADTYAGPTAFSEPETITVRDLMHSLADRGIM--YLT 310
            .:|..|.|.|||||:|.::...|||||||:|:|.||:..||.|..::.|.:.|   .|.:  ::|
Mouse   241 RSGSFCVGVDPNRNWDANFGGPGASSNPCSDSYHGPSPNSEVEVKSIVDFIKS---HGKVKAFIT 302

  Fly   311 LHSYGNYLLYPWGWTSDLPENWEDLDAVARTGAEAIENATGTVYTYGSSTNVLYIAAGASDDYGY 375
            ||||...|::|:|:....|:::.:||.||:..|::::...||.|..|...:|:|.|:|.|.|:.|
Mouse   303 LHSYSQLLMFPYGYKCAKPDDFNELDEVAQRAAQSLKRLHGTSYKVGPICSVIYQASGGSIDWAY 367

  Fly   376 YAGFNVSITMELPGAGSIGFNPPVTRIDEFVTETWIGIRAMAEKV 420
            ..|...|...||...|..||..|..:|.....|||:|::.:.|.|
Mouse   368 DLGIKYSFAFELRDTGYYGFLLPAKQILPTAEETWLGLKTIMEHV 412

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.