DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8562 and cpo

DIOPT Version :9

Sequence 1:NP_648118.1 Gene:CG8562 / 38828 FlyBaseID:FBgn0035779 Length:424 Species:Drosophila melanogaster
Sequence 2:NP_001139101.1 Gene:cpo / 100005630 ZFINID:ZDB-GENE-070619-6 Length:363 Species:Danio rerio


Alignment Length:301 Identity:104/301 - (34%)
Similarity:160/301 - (53%) Gaps:5/301 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly   123 RYYTHEEIINYIDDLAQRFPSRVFVKTVGWSYEQRVLKTITITNGDGKANKKVIFMDGGFHAREW 187
            :|:|.:||..:::.:.:..|..|...|.|.:||:|.:..:.| .......||.|:||.|.|||||
Zfish    34 KYHTMDEISAWMNQMQRENPDVVSTMTYGQTYEKRNITLLKI-GFSSTTPKKAIWMDCGIHAREW 97

  Fly   188 ISPAAVLYVIDQLVEQFEENAH---LLKDYDWVILPLVNADGYEHTQTGTLARMWRKTRQPYTYA 249
            |:||...:.:.:::..::.::.   |.|:.|:.|.|::|.|||.::......|:|||:|.| .:.
Zfish    98 IAPAFCQHFVKEVLGSYKTDSRVNMLFKNLDFYITPVLNMDGYIYSWLNNSTRLWRKSRSP-CHE 161

  Fly   250 GQTCYGADPNRNFDFHWNEEGASSNPCADTYAGPTAFSEPETITVRDLMHSLADRGIMYLTLHSY 314
            ..||.|.|.||||..:|...|.|.|.|::.|.|.||.||||...|.|.:.:..:..:.|||:|||
Zfish   162 NSTCSGTDLNRNFYANWGMVGISRNCCSEVYNGATALSEPEAEAVTDFLGAHQNHLLCYLTIHSY 226

  Fly   315 GNYLLYPWGWTSDLPENWEDLDAVARTGAEAIENATGTVYTYGSSTNVLYIAAGASDDYGYYAGF 379
            |..:|.|:|..:....|:::|..|....|:||:...|..|..|||.:|||..:|:|.|:....|.
Zfish   227 GQLILVPYGHPNISAPNYDELMEVGLAAAKAIKAVHGKSYKVGSSPDVLYPNSGSSRDFARLIGI 291

  Fly   380 NVSITMELPGAGSIGFNPPVTRIDEFVTETWIGIRAMAEKV 420
            ..|.|.||...|..||..|..:|.....|.:.|..::...|
Zfish   292 PYSFTFELRDEGQHGFILPEDQIQPTCQEAYEGAMSIINYV 332

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8562NP_648118.1 Propep_M14 30..99 CDD:280416
M14_CP_A-B_like 124..420 CDD:199844 103/298 (35%)
cpoNP_001139101.1 M14_CP_A-B_like 35..332 CDD:199844 103/298 (35%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170593450
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2866
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D208397at33208
OrthoFinder 1 1.000 - - FOG0000056
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11705
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
76.850

Return to query results.
Submit another query.