DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8563 and ccpp-6

DIOPT Version :9

Sequence 1:NP_001261515.1 Gene:CG8563 / 38826 FlyBaseID:FBgn0035777 Length:440 Species:Drosophila melanogaster
Sequence 2:NP_495012.2 Gene:ccpp-6 / 184043 WormBaseID:WBGene00017136 Length:459 Species:Caenorhabditis elegans


Alignment Length:300 Identity:68/300 - (22%)
Similarity:115/300 - (38%) Gaps:71/300 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   149 YHEVLSFMSGLAAR-YPQFCRYESLGRSNEGRHIAALSISL--NSRVRPRRVAYIQAATHGREWI 210
            |.::..:::.|.:| ||.|.| :.|.::.:.|.:..::|..  ::....:::.::.|..|..| .
 Worm   146 YGQMQIWLNELESRKYPFFHR-DLLVQTVQKRRVDLITIDATPDTFQGSKKMIFLTARVHPGE-S 208

  Fly   211 TTQTVLYLAYELLSNLRAFTRVLQDVEIF-LVPLVNPDGYEYTHTTDRFWRKNRHRYAGHSCSGV 274
            .:..|::...|.|.:.....:.|:.|..| ::|::||||.        |....|....||     
 Worm   209 PSSHVMHGIIEFLVSKDDRAQKLRKVYCFKIIPMLNPDGV--------FLGNYRCSLMGH----- 260

  Fly   275 DINRNF--GNHWNYQG--ASQNLCSEVYSGTAPNSEPETSAVVRYLEFNRNRVKLSLDVHSFGKF 335
            |:||.:  .:.|.:..  |.:||.::.      ::.|:...|: |::         |..||....
 Worm   261 DLNRMWRTPSDWAHPSIYAVKNLLTQY------DNNPQAQTVI-YVD---------LHAHSQKPN 309

  Fly   336 IFYPYGYAKNTVPPTVGTLR---------------SVALRAANQIGRYRGT-RYTTGTSASIL-Y 383
            .|. ||....:......|.|               |:.....|......|| |.|.|...|.| |
 Worm   310 CFL-YGNVNMSAVEEKSTFRQLWLPHLLADLSEDYSLEFTQFNTDVEKAGTGRRTMGDLLSCLCY 373

  Fly   384 EASGSLDDFAY------GNLGIP-----LSYTLELPGDEF 412
            ....|.  |:|      || ||.     |.|..|..|:.|
 Worm   374 TLEVSF--FSYRHTDSSGN-GIQHCTPYLQYKYEALGEAF 410

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8563NP_001261515.1 M14_CP_A-B_like 146..437 CDD:199844 67/299 (22%)
ccpp-6NP_495012.2 M14_AGBL4_like 153..418 CDD:133118 66/292 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2866
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.