DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8563 and cpo.1

DIOPT Version :9

Sequence 1:NP_001261515.1 Gene:CG8563 / 38826 FlyBaseID:FBgn0035777 Length:440 Species:Drosophila melanogaster
Sequence 2:XP_031748368.1 Gene:cpo.1 / 100145253 XenbaseID:XB-GENE-989447 Length:451 Species:Xenopus tropicalis


Alignment Length:461 Identity:130/461 - (28%)
Similarity:210/461 - (45%) Gaps:77/461 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LALCLVGLAGLGIANNLAGYEGYTKYTVQHGDENAFKYMVDLQTND-----------AELDFWLL 62
            |.:|:     |||...:..|     ..||:..:...|  :.|:|.|           .:||.|  
 Frog     6 LCICI-----LGILTQVGAY-----LKVQYNGDQVLK--LTLKTTDDCEHMQNICKQLQLDLW-- 56

  Fly    63 TRNSSVLTVSPRRK----------TQFEASLSSLGVSYEMQPLMELMAALQANSSFADDNYDGEY 117
             :.|.:..:.|.::          .:|:.:|....:.:|:.        ::......|.:..|:|
 Frog    57 -KPSRIEDIQPGKEMHVRIPFPLLQKFKENLHQYSIPFEVM--------IKDVQKLIDSSNVGDY 112

  Fly   118 EECQQDECEQAERPRRRTRRQARGFFSHYPRYH---EVLSFMSGLAARYPQFCRYESLGRSNEGR 179
                           ||.::....|  .|..||   |:..:|..:...|........||.:.|.|
 Frog   113 ---------------RRQKKILAEF--DYTTYHPMDEIYQWMDQVKEAYSDLVSMHYLGSTYELR 160

  Fly   180 HIAALSISLNSRVRPRRVAYIQAATHGREWITTQTVLYLAYELLSNLRA---FTRVLQDVEIFLV 241
            .|....|...|. :.:::.::....|.||||......:...|:|...:.   ..:||.:::.::|
 Frog   161 PIYYFKIGWPSD-KQKKIIWMDCGIHAREWIAVAYCQWFVKEILETHKTNPLLQKVLHNIDFYIV 224

  Fly   242 PLVNPDGYEYTHTTDRFWRKNRHRYAGHSCSGVDINRNFGNHWNYQGASQNLCSEVYSGTAPNSE 306
            |::|.||:.|:...:|.|||:|..:...||.|||:||||.:.|...|||.|...|.|.||.|.||
 Frog   225 PVLNIDGFVYSWNVNRLWRKSRSPHNNGSCYGVDLNRNFNSKWGSIGASNNCRDETYCGTGPASE 289

  Fly   307 PETSAVVRYLEFNRNRVKLSLDVHSFGKFIFYPYGYAKNTVPPTVG--TLRSVALRAANQIGRYR 369
            ||.:||.:.|...::.|...|.:||:|:.:..||||.|:   |::.  .:.:||.:||.::....
 Frog   290 PEVNAVSKLLGSLKSDVLCFLTIHSYGQLLLLPYGYTKD---PSINHEEMINVAQKAAAKLQEKH 351

  Fly   370 GTRYTTGTSASILYEASGSLDDFAYGNLGIPLSYTLELPGDEFH---VPAHDIIHVCKETFAGFI 431
            ||.|..|:::.:||..|||..|:| .:|||..|||.||.....|   :||:.|...|:||.||.:
 Frog   352 GTEYRVGSTSHLLYSNSGSSRDWA-TDLGINFSYTFELRDTGAHGFILPANQIRPTCEETMAGVM 415

  Fly   432 EFIRHV 437
            ..:.||
 Frog   416 TIVEHV 421

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8563NP_001261515.1 M14_CP_A-B_like 146..437 CDD:199844 102/301 (34%)
cpo.1XP_031748368.1 Propep_M14 36..105 CDD:396700 10/79 (13%)
M14_CPO 124..421 CDD:349466 102/301 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D208397at33208
OrthoFinder 1 1.000 - - FOG0000056
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.920

Return to query results.
Submit another query.