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Protein Alignment CG8564 and Cpa2

DIOPT Version :9

Sequence 1:	NP_001261514.1	Gene:	CG8564 / 38825	FlyBaseID:	FBgn0035776	Length:	520	Species:	Drosophila melanogaster
Sequence 2:	NP_001019869.1	Gene:	Cpa2 / 232680	MGIID:	3617840	Length:	417	Species:	Mus musculus

Alignment Length:	254	Identity:	79/254 - (31%)
Similarity:	131/254 - (51%)	Gaps:	15/254 - (5%)

- Green bases have known domain annotations that are detailed below.

  Fly   136 RKTVFIEAGTHAREWISVSTALNCIYQLTERYTRN---IEVLRKLRFIIVPLVNPDGYEYSRTKN 197
            :..::::||.|||||::.:|||....::...|..:   ..:|..|...::|:.|||||.:|:|.|
Mouse   167 KPAIWLDAGIHAREWVTQATALWTANKIASDYGTDPAITSLLNTLDVFLLPVTNPDGYVFSQTSN 231

  Fly   198 PKWRKNRRPHKSAKFVGTDCNRNYDIFWNSGPSKINR---NTYKGESPFSEPETRAMRCILDRMS 259
            ..|||.|.....:..||.|.|||:|..: .||...:.   ::|.|.||.||.|.::   |:|.:.
Mouse   232 RMWRKTRSKRSGSFCVGVDPNRNWDANF-GGPGASSNPCSDSYHGPSPNSEVEVKS---IVDFIK 292

  Fly   260 SN--LLFFLSLHSYGQSIMYPWGYCRDNPIYWRELSSLANSGKSAIKSYNGREYRTGSISCLTKR 322
            |:  :..|::||||.|.:|:|:||....|..:.||..:|.....::|..:|..|:.|.| |....
Mouse   293 SHGKVKAFITLHSYSQLLMFPYGYKCAKPDDFNELDEVAQRAAQSLKRLHGTSYKVGPI-CSVIY 356

  Fly   323 TIAGSVVDYVYGVLKVPMALVMEL-PSRELGFQPPVEMISQIGHESWYGIREMCKRSFD 380
            ..:|..:|:.|. |.:..:...|| .:...||..|.:.|.....|:|.|::.:.:...|
Mouse   357 QASGGSIDWAYD-LGIKYSFAFELRDTGYYGFLLPAKQILPTAEETWLGLKTIMEHVRD 414

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.