DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8564 and Cpb2

DIOPT Version :9

Sequence 1:NP_001261514.1 Gene:CG8564 / 38825 FlyBaseID:FBgn0035776 Length:520 Species:Drosophila melanogaster
Sequence 2:NP_446069.1 Gene:Cpb2 / 113936 RGDID:71035 Length:422 Species:Rattus norvegicus


Alignment Length:385 Identity:108/385 - (28%)
Similarity:175/385 - (45%) Gaps:69/385 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 ALLVVERLHLNIKCQTAKD--RSRTDATTALRRLVIPRPDILHTYLDYKQVNQ---YLQYLAQRY 71
            |.|...|:..|:.....:|  :.:|...|     |.||....: |..|..:|:   :::.:.:::
  Rat    81 AYLNASRIPFNVLMNNVEDLIQQQTSNDT-----VSPRASSSY-YEQYHSLNEIYSWIEVITEQH 139

  Fly    72 AHFVHVHILGHTHEKREIRALEINWMNSENVELSPQMREHSPRLFDIGPNGRFTVPVIHVGEHCR 136
            ...:....:|.::||..:..|:::.            :||                      ..:
  Rat   140 PDMLQKIYIGSSYEKYPLYVLKVSG------------KEH----------------------RVK 170

  Fly   137 KTVFIEAGTHAREWISVSTALNCIYQLTE------RYTRNIEVLRKLRFIIVPLVNPDGYEYSRT 195
            ..::|:.|.|||||||.:..|..|..:|:      .|||   :||.:.|.|:|::|.|||:|:..
  Rat   171 NAIWIDCGIHAREWISPAFCLWFIGYVTQFHGKENTYTR---LLRHVDFYIMPVMNVDGYDYTWK 232

  Fly   196 KNPKWRKNRRPHKSAKFVGTDCNRNY-DIFW-NSGPSKIN-RNTYKGESPFSEPETRAMRCILDR 257
            ||..|||||..|.:.:.||||.|||: ...| ..|.|..: ..||.|..|.||||.:|:...|.|
  Rat   233 KNRMWRKNRSVHMNNRCVGTDLNRNFASKHWCEKGASSFSCSETYCGLYPESEPEVKAVADFLRR 297

  Fly   258 MSSNLLFFLSLHSYGQSIMYPWGYCRDNPIYWRELSSLANSGKSAIKSYN-GREYRTGSISCLTK 321
            ..:::..::|:|||.|.|::|:.|.|.......|||.:|:....||:|.| ...|..||.|....
  Rat   298 NINHIKAYISMHSYSQQILFPYSYNRSKSKDHEELSLVASEAVRAIESINKNTRYTHGSGSESLY 362

  Fly   322 RTIAGSVVDYVYGVLKVPMALVMEL-PSRELGFQPP--------VEMISQIGHESWYGIR 372
            ....|| .|::|. |.:..:..:|| .:...||..|        .|.::.:...:|:.||
  Rat   363 LAPGGS-DDWIYD-LGIKYSFTIELRDTGRYGFLLPERFIKPTCAEALAAVSKIAWHVIR 420

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
CG8564NP_001261514.1 M14_CP_A-B_like 54..377 CDD:199844 98/341 (29%)
Cpb2NP_446069.1 Propep_M14 32..103 CDD:280416 5/21 (24%)
M14_CPB2 118..419 CDD:199868 96/340 (28%)
Substrate binding. /evidence=ECO:0000250|UniProtKB:P00730 180..183 2/2 (100%)