Sequence 1: | NP_523959.2 | Gene: | smid / 38824 | FlyBaseID: | FBgn0016983 | Length: | 944 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_009636.3 | Gene: | SEC18 / 852372 | SGDID: | S000000284 | Length: | 758 | Species: | Saccharomyces cerevisiae |
Alignment Length: | 425 | Identity: | 128/425 - (30%) |
---|---|---|---|
Similarity: | 213/425 - (50%) | Gaps: | 77/425 - (18%) |
- Green bases have known domain annotations that are detailed below.
Fly 568 KKSAEKPTDAAMDVDNVAPEEPKKAVEQEVDSSSSNDEY---YEPTLAELTNFLDNPPEEFADPN 629
Fly 630 FCLTLIDFVDAIKV--MQPSAK----------------------REGFITV-------------- 656
Fly 657 -PDTTWDD--IGALEK-IREELKLAVLAPVKYPEMLERLGLTAPSGVLLCGPPGCGKTLLAKAI- 716
Fly 717 ----ANEAGINFISVKGPELMNMYVGESERAVRACFQ--------RARNSAPCVIFFDEFDSLCP 769
Fly 770 KRSDGGDGNNSGTRIVNQLLTEMDGVEERKGVYILAATNRPDIIDPAILRPGRLDTILYVGFPEQ 834
Fly 835 SERTEILKATTKN-GKRPVLADDVDLDEIAAQTEGYTGADLAGLVKQASMFSLRQSLN--NGDTN 896
Fly 897 LD-----DLCVRSQHFQEALQQLRPS--VNEQDRK 924 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
smid | NP_523959.2 | Nucleolin_bd | 2..71 | CDD:293330 | |
SpoVK | 271..919 | CDD:223540 | 125/418 (30%) | ||
AAA | 287..418 | CDD:278434 | |||
P-loop_NTPase | 679..>716 | CDD:304359 | 16/36 (44%) | ||
AAA | 699..830 | CDD:278434 | 59/143 (41%) | ||
SEC18 | NP_009636.3 | CDC48_N | 29..98 | CDD:215012 | |
CDC48_2 | 134..204 | CDD:215011 | 13/73 (18%) | ||
RecA-like_NSF-SEC18_r1-like | 240..416 | CDD:410912 | 68/179 (38%) | ||
SpoVK | 263..758 | CDD:223540 | 99/263 (38%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG0464 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.810 |