DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment smid and AT1G45000

DIOPT Version :9

Sequence 1:	NP_523959.2	Gene:	smid / 38824	FlyBaseID:	FBgn0016983	Length:	944	Species:	Drosophila melanogaster
Sequence 2:	NP_175120.1	Gene:	AT1G45000 / 841065	AraportID:	AT1G45000	Length:	399	Species:	Arabidopsis thaliana

Alignment Length:	323	Identity:	108/323 - (33%)
Similarity:	172/323 - (53%)	Gaps:	53/323 - (16%)

- Green bases have known domain annotations that are detailed below.

  Fly   196 VVGNRAKNLSED------------------AVPRSKDHRNVPGLYQQLHQNQSRDRLRKFKRDLE 242
            |||.|:|...|.                  |:||..|    |.:|..||::..
plant    86 VVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVD----PVVYNMLHEDPG------------ 134

  Fly   243 VQHPTESFRDIGGMDSTLKELCEML-IHIKSPEFYFQLGLLPSRGLLLHGPPGCGKTFLARAISG 306
                ..|:..:||:...::||.|.: :.:.:||.:.::|:.|.:|:||:||||.|||.|||||:.
plant   135 ----NISYSAVGGLGDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIAS 195

  Fly   307 QLKMPLMEIPATELIGGISGESEERIREVFDQAIGYSPCVLFIDEIDAIGGNR--QWASKDME-R 368
            .:....:::.::.:|....|||...|||:|:.|..:.||::|:||||||||.|  :..|.|.| :
plant   196 NIDANFLKVVSSAIIDKYIGESARLIREMFNYAREHQPCIIFMDEIDAIGGRRFSEGTSADREIQ 260

  Fly   369 RIVSQLISSLDNLKANEFGQSVVVIAATTRPDVLDPGLRRIGRFDHEIAIHIPSRKERREILRIQ 433
            |.:.:|::.||..  ::.|: |.:|.||.|||||||.|.|.||.|.:|.|.:|:.:.|.|||:|.
plant   261 RTLMELLNQLDGF--DQLGK-VKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIH 322

  Fly   434 CEGLSVDPKLNYDKIAELTPGYVGADLMALVSRAASVAVKRRS--------MKKFRELHAASE 488
            ..|::...:::|:.|.:|..|:.||||..:.:.|...|::...        ||..|:|..|.:
plant   323 ASGIAKHGEIDYEAIVKLGEGFNGADLRNICTEAGMFAIRAERDYVIHEDFMKAVRKLSEAKK 385

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
smid	NP_523959.2	Nucleolin_bd	2..71	CDD:293330
		SpoVK	271..919	CDD:223540	88/229 (38%)
		AAA	287..418	CDD:278434	60/133 (45%)
		P-loop_NTPase	679..>716	CDD:304359
		AAA	699..830	CDD:278434
AT1G45000	NP_175120.1	RPT1	17..390	CDD:224143	108/323 (33%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910