Protein Alignment smid and AT5G57480

DIOPT Version :9

• Sequence 1: NP_523959.2
• Gene: smid / 38824
• FlyBaseID: FBgn0016983
• Length: 944
• Species: Drosophila melanogaster
• Sequence 2: NP_200556.1
• Gene: AT5G57480 / 835852
• AraportID: AT5G57480
• Length: 520
• Species: Arabidopsis thaliana
• Alignment Length: 585
• Identity: 133/585 - (22%)
• Similarity: 205/585 - (35%)
• Gaps: 162/585 - (27%)

  Fly    30 LDVKQMTRELMQK-YPEYSRRKFGPFRQLVHQAFSIISESYNLDKVSSSEEDCVSEDSEPPPTNS 93
            |.|....:.|||. :|...|..|..|...:...||    ||           |..:.:|....|:
plant    12 LGVLAFCQSLMQSIFPPELRFAFLKFFNRIFHVFS----SY-----------CYFDITEIDGVNT 61

  Fly    94 VMNNMMNS--LYSQPRKPLAPKPIS-----EPIDISSGDENEDDSNTKTTNGDGVAAAAAPPPPT 151
              |.:.|:  ||......:|...:|     ....|:.|..| :||...|.|  ||..........
plant    62 --NELYNAVQLYLSSSVSIAGNRLSLTRAVNSSSITFGLSN-NDSIVDTFN--GVTVLWEHVVTQ 121

  Fly   152 PAVQGSALKRLMEEVPEIAVAAKKVAKPNTIHVSSSEAIQKLHQVVGNRAKN----LSEDAVPRS 212
            ...|..|.:.|.||.....:..||..|...::......:::.:::   |.||    |..::...|
plant   122 RQTQTFAWRPLPEEKRGFTLRIKKKDKTLILNSYLDYIMERANEI---RRKNQDRLLYTNSRGGS 183

  Fly   213 KDHRNVPGLYQQLHQNQSRDRLRKFKRDLEVQHPTESFRDIGGMD--------STLKELCEMLIH 269
            .|.|..|.                  ..:..:||: :|..: .||        ..||:..|..:
plant   184 LDSRGHPW------------------ESVPFKHPS-TFETL-AMDPRKKQQIMDDLKDFAEGQV- 227

  Fly   270 IKSPEFYFQLGLLPSRGLLLHGPPGCGKTFLARAISGQLKMPLMEIPATELIGGISGESEERIRE 334
                 ||.:.|....||.||:||||.||:.:..|::..|...:.::..||:      .|...:|:
plant   228 -----FYQKTGRAWKRGYLLYGPPGTGKSSMIAAMANYLGYDIYDLELTEV------HSNSELRK 281

  Fly   335 VFDQAIGYSPCVLFIDEIDA-------------IGGNRQWASKDMERR----------------- 369
            :..:.  .|..::.|::||.             :...|.:  .|.|.|
plant   282 LLMKT--SSKSIIVIEDIDCSINLTNRKKNSSNVSSQRSY--YDAETRNGSGSGSGGSGEEGGNG 342

  Fly   370 ---IVSQLISSLDNLKANEFGQSVVVIAATTRPDVLDPGLRRIGRFDHEIAI---HIPSRKERRE 428
               .:|.|::..|.|.:. .|...:.:..|...:.|||.|.|.||.|..|.:   :.||.|
plant   343 NTITLSGLLNFTDGLWSC-CGSERIFVFTTNHIEKLDPALLRSGRMDMHIYMSFCNFPSLK---- 402

  Fly   429 ILRIQCEGLSVDPKLNYDKI---------AELTPGYVGADLMALVSRAASVAVKRRSMKKFRELH 484
            ||.....|..|: .:|.|.:         ||:||..|..   ||:..      :|...|..|||
plant   403 ILLKNYLGYGVE-DINGDVLKEMEMVVEKAEMTPADVSE---ALIKN------RRDKEKAIREL- 456

  Fly   485 AASEKNMTTVTLDDDEPSEDAGETPVPDSK-----GEETAKDAEAEQK---VDGDKETSAKDKSE 541
                       |:|   .:..||..|.|.|     |..|..:...||:   :|...|....|:.|
plant   457 -----------LED---LKSRGERNVKDGKLRGGSGNLTELEVVEEQEKRAIDSQNEDEDHDEEE 507

  Fly   542  541
            plant   508  507

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
smid	NP_523959.2	Nucleolin_bd	2..71	CDD:293330	13/41 (32%)
		SpoVK	271..919	CDD:223540	78/324 (24%)
		AAA	287..418	CDD:278434	37/163 (23%)
		P-loop_NTPase	679..>716	CDD:304359
		AAA	699..830	CDD:278434
AT5G57480	NP_200556.1	AAA_assoc	26..119	CDD:405113	26/112 (23%)
		P-loop_NTPase	159..>261	CDD:422963	30/130 (23%)
		RecA-like_BCS1	215..393	CDD:410918	45/194 (23%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910