Protein Alignment smid and AT4G28000

DIOPT Version :9

• Sequence 1: NP_523959.2
• Gene: smid / 38824
• FlyBaseID: FBgn0016983
• Length: 944
• Species: Drosophila melanogaster
• Sequence 2: NP_001328776.1
• Gene: AT4G28000 / 828913
• AraportID: AT4G28000
• Length: 832
• Species: Arabidopsis thaliana
• Alignment Length: 916
• Identity: 210/916 - (22%)
• Similarity: 331/916 - (36%)
• Gaps: 315/916 - (34%)

  Fly    62 FSI-ISESYNLDKVSSSEEDCVSEDSEPPPTNSVMNNMMNSLYSQPRKPLAPKPISEPIDISSGD 125
            ||| |...|...|...|.:..:||     .|...|:|:|.|                 |.:.|..
plant   139 FSIKIQSKYGCVKKEPSHKRSISE-----LTMDKMSNLMGS-----------------ISVLSQK 181

  Fly   126 ENEDDSNTKTTNGD-----GVAAAAAPPPPTPAVQGSALKRLMEEVPEIAVAAKKVAKPNTIHVS 185
            |....:..:.|:|:     |....:.||         .|||       .|.||..::..::...:
plant   182 EATRGTLRRHTSGNDLHSRGFDVTSQPP---------RLKR-------NASAASDMSSISSRSAT 230

  Fly   186 SSEAIQKLHQVVGNRAKNLSEDAVPRSKDHRNVPGLYQQLHQNQSRDRLRKFKRDLEVQHPTESF 250
            |..|..|       |:.||..|      :...:..||:.|......:.:..:.||:|
plant   231 SVSASSK-------RSANLCFD------ERLFLQSLYKVLVSISETNPIIIYLRDVE-------- 274

  Fly   251 RDIGGMDSTLKELCEMLIHIKSPEFYFQLGLLPSRGLLLHGPPGCGKTF--LARAISGQLKMPLM 313
                       :||:      |..||                    |.|  |...:||    |::
plant   275 -----------KLCQ------SERFY--------------------KLFQRLLTKLSG----PVL 298

  Fly   314 EIPATELIGGISGESEERIREVFDQAIGYSPCVLFIDEIDAIGGNRQWASKDMERRIVSQLISSL 378
                  ::|....|.|:..:||     |.....||...|:.       ...:.|.:::|......
plant   299 ------VLGSRLLEPEDDCQEV-----GEGISALFPYNIEI-------RPPEDENQLMSWKTRFE 345

  Fly   379 DNLKANEFGQSVVVIAATTRPDVLDPGLRRIGRFDHEIAIHIPSRKERREILR---IQCEGLSVD 440
            |::|..:|..:...||                                 |:|.   ::|:.|.
plant   346 DDMKVIQFQDNKNHIA---------------------------------EVLAANDLECDDLG-- 375

  Fly   441 PKLNYDKIAELTPGYVGADLMALVSRAASVAVKRRSMKKFRELHAASEKNMTTVTLDDDEPSEDA 505
                         ....||.|.|.|....:.|...|      .|..:.|          ||....
plant   376 -------------SICHADTMFLSSHIEEIVVSAIS------YHLMNNK----------EPEYKN 411

  Fly   506 GETPV------------PDSKG--EETAK-DAEAEQKV-DGDKETSAKDKSEGDSPNIETPKKAT 554
            |...:            .:.:|  |::.| |...:.|| :|:..|.::.|||...|.
plant   412 GRLVISSNSLSHGLNILQEGQGCFEDSLKLDTNIDSKVEEGEGITKSESKSETTVPE-------- 468

  Fly   555 NGNSSIKSPQKTPKKSAEKPTDAAMDVDNVAPE-EPKKAVEQEVDSSSSNDEYYEPTLAELTNFL 618
            |.|.|..|   .|....|.|......|..|||: |.:|.:..||
plant   469 NKNESDTS---IPAAKNECPLPPKAPVHEVAPDNEFEKRIRPEV--------------------- 509

  Fly   619 DNPPEEFADPNFCLTLIDFVDAIKVMQPSAKREGFITVPDTTWDDIGALEKIREELKLAVLAPVK 683
             .|..|..                                .|:.|||:|::.:|.|:..|:.|::
plant   510 -IPANEIG--------------------------------VTFADIGSLDETKESLQELVMLPLR 541

  Fly   684 YPEMLERLGLTAP-SGVLLCGPPGCGKTLLAKAIANEAGINFISVKGPELMNMYVGESERAVRAC 747
            .|::.:. ||..| .|:||.||||.|||::|||||||||.:||:|....:.:.:.||.|:.|||.
plant   542 RPDLFKG-GLLKPCRGILLFGPPGTGKTMMAKAIANEAGASFINVSMSTITSKWFGEDEKNVRAL 605

  Fly   748 FQRARNSAPCVIFFDEFDSLCPKRSDGGDGNNSGTRIVNQLLTEMDGVEERKG--VYILAATNRP 810
            |..|...:|.:||.||.||:..:|:..|: :.:..:|.|:.:|..||:....|  :.:|||||||
plant   606 FTLAAKVSPTIIFVDEVDSMLGQRTRVGE-HEAMRKIKNEFMTHWDGLMSNAGDRILVLAATNRP 669

  Fly   811 DIIDPAILRPGRLDTILYVGFPEQSERTEILKATTKNGKRPVLADDVDLDEIAAQTEGYTGADLA 875
            ..:|.||:|  |.:..:.||.|....|.:||:......|    .:::|..|:|..|:||:|:||.
plant   670 FDLDEAIIR--RFERRIMVGLPSVESREKILRTLLSKEK----TENLDFQELAQMTDGYSGSDLK 728

  Fly   876 GLVKQASMFSLRQSLNNGDTNLDDLCVR-------------SQHFQEALQQ--------LRPSVN 919
            .....|:...:|:.:...       |::             |:...||.::        ||| ::
plant   729 NFCTTAAYRPVRELIKQE-------CLKDQERRKREEAEKNSEEGSEAKEEVSEERGITLRP-LS 785

  Fly   920 EQDRKI 925
            .:|.|:
plant   786 MEDMKV 791

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
smid	NP_523959.2	Nucleolin_bd	2..71	CDD:293330	5/9 (56%)
		SpoVK	271..919	CDD:223540	165/693 (24%)
		AAA	287..418	CDD:278434	22/132 (17%)
		P-loop_NTPase	679..>716	CDD:304359	17/37 (46%)
		AAA	699..830	CDD:278434	56/132 (42%)
AT4G28000	NP_001328776.1	None

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG0464
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	3	2.810