DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment smid and AT4G25835

DIOPT Version :9

Sequence 1:	NP_523959.2	Gene:	smid / 38824	FlyBaseID:	FBgn0016983	Length:	944	Species:	Drosophila melanogaster
Sequence 2:	NP_567730.1	Gene:	AT4G25835 / 828689	AraportID:	AT4G25835	Length:	506	Species:	Arabidopsis thaliana

Alignment Length:	474	Identity:	104/474 - (21%)
Similarity:	168/474 - (35%)	Gaps:	170/474 - (35%)

- Green bases have known domain annotations that are detailed below.

  Fly   580 DVDNVAPEEPKKAVE-----------------QEVDSSS-----SNDEYYEPTLAELT------- 615
            ::|.|...|...||:                 :.|:|||     ||::....|...:|
plant    55 EIDGVNTNELYNAVQLYLSSSVSIAGNRLSLTRAVNSSSVTFGLSNNDSIVDTFNSVTVVWEHIV 119

  Fly   616 ------NFLDNP-PEE---FA------DPNFCL-TLIDFV----DAIKVMQP-----SAKREGFI 654
                  .|...| |||   |.      |.|..| :.:|::    :.|:.:..     :..|.|.:
plant   120 TQRQTQTFAWRPMPEEKRGFTLRIKKKDKNLILDSYLDYIMEKANEIRRLNQDRLLYTNSRGGSL 184

  Fly   655 TVPDTTWDDIGALEKIREELKLAVLAPVKYPEML-------------ERLGLTAPSGVLLCGPPG 706
            ......|:.:..  |.........:.|||..:::             ||.|.....|.||.||||
plant   185 DSRGLPWESVPF--KHPSTFDTLAMDPVKKQQIMEDLKDFAECQSFYERTGRAWKRGYLLYGPPG 247

  Fly   707 CGKTLLAKAIANEAGINFISVKGPELMNMYVGESERAVRACFQRARNSAPCVIFFDEFDSLC--- 768
            .||:.:..|:||....:...::..|:      :|...:|....  :.|:..:|..::.|  |
plant   248 TGKSSMIAAMANYLRYDIYDLELTEV------KSNSELRKLLM--KTSSKSIIVIEDID--CSIN 302

  Fly   769 -----PKRSDG-----------------GDGNNSGTRIVNQLLTEMDGV-----EERKGVYILAA 806
                 .|:|.|                 ||||   |..::.||...||:     .||..|:   .
plant   303 LTNRNKKQSTGSYNEPEMLTGSGLGDDLGDGN---TITLSGLLNFTDGLWSCCGSERIFVF---T 361

  Fly   807 TNRPDIIDPAILRPGRLDTIL----------------YVGFPEQSERTEILKATTKNGKRPVLAD 855
            ||..:.:|||:||.||:|..:                |:||.|......:||.         ||:
plant   362 TNHIEKLDPALLRSGRMDMHIHMSYCTFSSVKILLRNYLGFEEGDLNDVVLKE---------LAE 417

  Fly   856 DVDLDEIAAQTEGYTGADLA-GLVK---------QASMFSLRQSLNNGDTNLDDLCVRSQHFQEA 910
            .||..||       |.||:: .|:|         :..:..||..:...:.|          .:..
plant   418 VVDRAEI-------TPADVSEALIKNRRDKERAVRELLVDLRSRVERNEKN----------GKSR 465

  Fly   911 LQQLRPSVNEQDRKIYDKL 929
            :|.:  |:.||:.:.:|.|
plant   466 VQNV--SLEEQENRAFDSL 482

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
smid	NP_523959.2	Nucleolin_bd	2..71	CDD:293330
		SpoVK	271..919	CDD:223540	100/462 (22%)
		AAA	287..418	CDD:278434
		P-loop_NTPase	679..>716	CDD:304359	15/49 (31%)
		AAA	699..830	CDD:278434	44/176 (25%)
AT4G25835	NP_567730.1	AAA_assoc	26..119	CDD:291061	13/63 (21%)
		P-loop_NTPase	<178..>296	CDD:304359	27/127 (21%)
		AAA	237..384	CDD:214640	44/162 (27%)
		AAA	240..386	CDD:278434	43/161 (27%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910