Sequence 1: | NP_523959.2 | Gene: | smid / 38824 | FlyBaseID: | FBgn0016983 | Length: | 944 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001326134.1 | Gene: | CDC48C / 821105 | AraportID: | AT3G01610 | Length: | 830 | Species: | Arabidopsis thaliana |
Alignment Length: | 935 | Identity: | 312/935 - (33%) |
---|---|---|---|
Similarity: | 451/935 - (48%) | Gaps: | 228/935 - (24%) |
- Green bases have known domain annotations that are detailed below.
Fly 48 RRKFGPFRQLVHQAFSI----ISESYNLDKVSSSEED--------CVSEDSEPPPTNSVMNNMMN 100
Fly 101 SLYSQPRKPLAPKPISEPIDISSGDENEDDSNTKTTNGDGVAAAAAPPPPTPAVQGSALKRLMEE 165
Fly 166 VPEIAVAAKKVAKPNTIHVSSSEAIQKLHQVVGNRA-KNLSEDAVPRSKDHRNVPGLYQQLHQNQ 229
Fly 230 SRDRL-----RKFKR------------DLEVQ---HPTESFRDIGGMDSTLKEL-CEMLIHIKSP 273
Fly 274 EFYFQLGLLPSRGLLLHGPPGCGKTFLARAISGQLKMPLMEIPATELIGGISGESEERIREVFDQ 338
Fly 339 AIGYSPCVLFIDEIDAIGGNRQWASKDMERRIVSQLISSLD--------NLKANEFGQSVVVIAA 395
Fly 396 TTRPDVLDPGLRRIGRFDHEIAIHIPSRKERREILRIQCEGLSVDPKLNYDKIAELTPGYVGADL 460
Fly 461 MALVSRAASVAVKRRSMKKFRELHAASEKNMTTVTLDDDEPSEDAGETPVPDSKGEETAKDAEAE 525
Fly 526 QKVDGDKETSAKDKSEGDSPNIETPKKATNGNSSIKSPQKTPKKSAEKPTDAAMDVDNVAPEEPK 590
Fly 591 KAVEQEVDSSSSNDEYYEPTLAELTNFLDNP-PEEFADPNFCLTLIDFVDAIKVMQPSAKREGFI 654
Fly 655 TVPDTTWDDIGALEKIREELKLAVLAPVKYPEMLERLGLTAPSGVLLCGPPGCGKTLLAKAIANE 719
Fly 720 AGINFISVKGPELMNMYVGESERAVRACFQRARNSAPCVIFFDEFDSLCPKRSDGGDGNNSGTRI 784
Fly 785 VNQLLTEMDGVEERKGVYILAATNRPDIIDPAILRPGRLDTILYVGFPEQSERTEILKATTKNGK 849
Fly 850 RPVLADDVDLDEIAAQT-EGYTGADLAGLVKQASMFSLRQSLNNGDTNLDDL-----C-VRSQHF 907
Fly 908 QEALQQLRPSVNEQDRKIYDKLRLK 932 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
smid | NP_523959.2 | Nucleolin_bd | 2..71 | CDD:293330 | 5/26 (19%) |
SpoVK | 271..919 | CDD:223540 | 251/663 (38%) | ||
AAA | 287..418 | CDD:278434 | 71/138 (51%) | ||
P-loop_NTPase | 679..>716 | CDD:304359 | 18/36 (50%) | ||
AAA | 699..830 | CDD:278434 | 80/130 (62%) | ||
CDC48C | NP_001326134.1 | CDC48 | <223..808 | CDD:273521 | 272/711 (38%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Domainoid | 1 | 1.000 | 137 | 1.000 | Domainoid score | I1588 |
eggNOG | 1 | 0.900 | - | - | E1_COG0464 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 1 | 1.000 | - | - | H1902 | |
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 1 | 1.010 | - | - | QHG53526 | |
OrthoDB | 1 | 1.010 | - | - | D194195at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000137 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_102053 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR23077 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 1 | 1.000 | - | - | X2802 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 1 | 0.960 | - | - | ||
13 | 12.790 |