Protein Alignment smid and drc11

DIOPT Version :10

• Sequence 1: NP_523959.2
• Gene: smid / 38824
• FlyBaseID: FBgn0016983
• Length: 944
• Species: Drosophila melanogaster
• Sequence 2: XP_073809094.1
• Gene: drc11 / 553364
• ZFINID: ZDB-GENE-050208-768
• Length: 846
• Species: Danio rerio
• Alignment Length: 651
• Identity: 130/651 - (19%)
• Similarity: 221/651 - (33%)
• Gaps: 203/651 - (31%)

  Fly    17 VKKYLEEHIGETYLDVKQMTRELMQKYPEYSRRKFGPFRQLVHQ--------AFSIISESYNLDK 73
            :|:.|:|.|.:.:|:    .|:...|:|::...:.|....:..|        .|:...|.....|
Zfish   290 IKESLQEQIRQWFLE----CRDASGKFPDFPSPEDGGSASIFAQKTPEQVAAEFAAKEEEREKKK 350

  Fly    74 VSSSEEDCVSEDSEPPPTNSVMNNMMNSLYSQPRKPLAPKPISEPIDISSGDENEDDSNTKTTNG 138
            ...||:|..:.|                  .:.:|...||...     ..||..|:::..|.|
Zfish   351 KLKSEKDKKAND------------------RKEKKKGKPKGKG-----GKGDTEEEETGWKMT-- 390

  Fly   139 DGVAAAAAPPPPTPAV-QGSAL--------------------------KRLMEEVPEIAVAA--- 173
                    |....|.| :|:.|                          |||..|| |:.|..
Zfish   391 --------PSNFLPTVFEGAKLYKEVWQNRDEQQNFLQRFDAQLVREEKRLEVEV-ELRVQVDEL 446

  Fly   174 --------------------KKVAKPNTIHVSSSEAIQKLHQVVGNRAKNLSEDAVPRSKDHRNV 218
                                |||.|       ||:..:|..:..|.:.|...:|...    .|.:
Zfish   447 MRQELKNLKLVVDRDKGKKKKKVKK-------SSKKKKKKGRKTGKKKKKKEKDLTA----DRTI 500

  Fly   219 PGLYQQL---------HQNQSRDRLRKFK------RDLEVQHPTESFRDIGGMDST--LKELCEM 266
            ..||::|         ...:..|.:.::.      |..::: |..|..|:..:.:.  :..|...
Zfish   501 ESLYEELVLEGIIIRPMNVKLSDYIGEYSYLGTTLRQADIE-PMPSLSDVRQLIALYGILPLGSQ 564

  Fly   267 LIHIKSPEFYFQLGLLPSRGLLLHGPPGCGKTFLARAISGQLKMPLMEIPATELIGGISGES--E 329
            .:|.:.|..         |.|||.||.|.||..|..|:..:....|..:..:.|.|...|:|  :
Zfish   565 CVHERGPLI---------RALLLTGPQGVGKKMLVHALCTETGANLFNLSPSTLAGKYPGKSGLQ 620

  Fly   330 ERIREVFDQAIGYSPCVLFIDEIDAIGGNR-QWASKDME-RRIVSQLISSLDNLKANEFGQSVVV 392
            ..:..||..|....|.|::|.:.:.....: ....|:|| :|:...|...|.::||.:   .|:|
Zfish   621 LLLHMVFKVARQLQPSVIWIGDAEKTFYKKVPKLEKEMEPKRLKKTLPKILKSIKAED---RVLV 682

  Fly   393 IAATTRPDVLDPGLRRIGRFDHEIAIHIPSRKERREILRI----------------QCEGLSVDP 441
            :..:.||            ||.:|.   |..|..::|:.|                |..|..:||
Zfish   683 VGTSRRP------------FDADIK---PFCKVYKKIILIPRPDYASRFTLWKELLQAHGALLDP 732

  Fly   442 KLNYDKIAELTPGYVGADLMALVSRAASVAVKRRSMKKFRELHAASEKNMTTV-----------T 495
            ||:...:|::|.||....::..:.   ::.:..|       |...:::.:|.|           .
Zfish   733 KLDLSSLAKVTDGYTQGHILQAIQ---TILIPHR-------LELQAKRPLTAVEFIPPLARQDPV 787

  Fly   496 LDDDEPSEDAGETPVPDSKGEETAKDAEAEQKVDGDKETSAKDKSEGDSPNIETPKKATNGNSSI 560
            ..::|.|..|..:..|..|....|..|..||.:      ..|.|::|.    :..||...|....
Zfish   788 YKEEEESFKAWYSRTPLGKKRARAAKASEEQAI------LKKGKTKGG----KLQKKGKEGKKKK 842

  Fly   561 K 561
            |
Zfish   843 K 843

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
smid	NP_523959.2	Nucleolin_bd	2..71	CDD:465247	12/61 (20%)
		CDC48	<242..933	CDD:273521	77/353 (22%)
drc11	XP_073809094.1	None