Protein Alignment smid and psmc4

DIOPT Version :9

• Sequence 1: NP_523959.2
• Gene: smid / 38824
• FlyBaseID: FBgn0016983
• Length: 944
• Species: Drosophila melanogaster
• Sequence 2: NP_001008010.1
• Gene: psmc4 / 493372
• XenbaseID: XB-GENE-5855370
• Length: 420
• Species: Xenopus tropicalis
• Alignment Length: 449
• Identity: 124/449 - (27%)
• Similarity: 220/449 - (48%)
• Gaps: 58/449 - (12%)

  Fly   486 ASEKNMTTVTLDDDEPSEDAGETPVPDSKGEETAKDAEAEQKVDGDKETSAKDKSEGDSPNIETP 550
            ||.:.:|.::....|| ||..:......|.::..:..|.:::...|::.:.|
 Frog    21 ASSRPITALSFLGPEP-EDLEDLYSRYKKLQQELEFLEVQEEYIKDEQKNLK------------- 71

  Fly   551 KKATNGNSSIKSPQKTPKKSAEKPTDAAMDVDNVAPEEPKKAVEQE--VDSSSSNDEYYEPTLAE 613
            |:..:....:|..|..|                :...:..:||:|.  :..|::...||
 Frog    72 KEFLHAQEEVKRIQSIP----------------LVIGQFLEAVDQNTAIVGSTTGSNYY------ 114

  Fly   614 LTNFLDNPPEEFADPNFCLTLIDFVDA-IKVMQPSAKREGFITV----PDTTWDDIGALEKIREE 673
             ...|.....|...||..:.|....:| :.|:.|.|.....:..    ||..:.|||.::..::|
 Frog   115 -VRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVLYSDIGGMDIQKQE 178

  Fly   674 LKLAVLAPVKYPEMLERLGLTAPSGVLLCGPPGCGKTLLAKAIANEAGINFISVKGPELMNMYVG 738
            ::.||..|:.:.|:.:::|:..|.|||:.||||||||:||||:|:.....||.|.|.|.:..|:|
 Frog   179 VREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLG 243

  Fly   739 ESERAVRACFQRARNSAPCVIFFDEFDSLCPKRSDGGDG-NNSGTRIVNQLLTEMDGVEERKGVY 802
            |..|.||..|:.|:.:||.:||.||.|::..||.|...| :....||:.:||.:|||.::...|.
 Frog   244 EGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVK 308

  Fly   803 ILAATNRPDIIDPAILRPGRLDTILYVGFPEQSERTEILKATTKNGKRPVLADDVDLDEIAAQTE 867
            ::.||||.|.:|||:|||||||..:....|::.::..|....|   .:..|:::|||::..|:.:
 Frog   309 VIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTIT---SKMNLSEEVDLEDYVARPD 370

  Fly   868 GYTGADLAGLVKQASMFSLRQSLNNGDTNLDDLCVRSQHFQEALQQLRPSVNEQDRKIY 926
            ..:|||:..:.::..|.::|:         :...|.::.|::|.:.:... :||:.:.|
 Frog   371 KISGADINSICQEGGMLAVRE---------NRYIVLAKDFEKAYKTVIKK-DEQEHEFY 419

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
smid	NP_523959.2	Nucleolin_bd	2..71	CDD:293330
		SpoVK	271..919	CDD:223540	121/440 (28%)
		AAA	287..418	CDD:278434
		P-loop_NTPase	679..>716	CDD:304359	18/36 (50%)
		AAA	699..830	CDD:278434	62/131 (47%)
psmc4	NP_001008010.1	PTZ00454	36..420	CDD:240423	120/434 (28%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910