Sequence 1: | NP_523959.2 | Gene: | smid / 38824 | FlyBaseID: | FBgn0016983 | Length: | 944 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001099954.1 | Gene: | Fign / 295649 | RGDID: | 1308174 | Length: | 759 | Species: | Rattus norvegicus |
Alignment Length: | 481 | Identity: | 113/481 - (23%) |
---|---|---|---|
Similarity: | 203/481 - (42%) | Gaps: | 91/481 - (18%) |
- Green bases have known domain annotations that are detailed below.
Fly 506 GETPV-PDSKGEETAKDAEAE---QKVDGDKETSAKDKSEGDSPNIETP---------KKATNGN 557
Fly 558 SSIKSPQKTPKKSAEKPTDAAMDVDNVAPEEPKKAVEQEVD------------------SSSSND 604
Fly 605 EYYEPTLAE--------LTNFLDNPPEEFAD----------PNFCLTLIDFVDAIKVMQPSAKRE 651
Fly 652 GFITVPDTTWDDIGALEKIREELKLAVLAPVKYPEMLERLGLTA-PSGVLLCGPPGCGKTLLAKA 715
Fly 716 IANEAGINFISVKGPELMNMYVGESERAVRACFQRARNSAPCVIFFDEFDSLCPKRSDGGDGNNS 780
Fly 781 GTRIVNQLLTEMDGV----EERKGVYILAATNRPDIIDPAILRPGRLDTILYVGFPEQSERTEIL 841
Fly 842 KATTKNGKRPVLADDVDLDEIAAQTEGYTGADLAGLVKQASMFSLRQSLNNGDTNLDDLC----- 901
Fly 902 -VRSQHFQEALQQLRPSVNEQDRKIY 926 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
smid | NP_523959.2 | Nucleolin_bd | 2..71 | CDD:293330 | |
SpoVK | 271..919 | CDD:223540 | 112/472 (24%) | ||
AAA | 287..418 | CDD:278434 | |||
P-loop_NTPase | 679..>716 | CDD:304359 | 18/37 (49%) | ||
AAA | 699..830 | CDD:278434 | 42/134 (31%) | ||
Fign | NP_001099954.1 | AAA | 519..654 | CDD:214640 | 43/140 (31%) |
AAA | 522..652 | CDD:278434 | 42/135 (31%) | ||
Vps4_C | <723..756 | CDD:286426 | 6/26 (23%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG0464 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.900 |