Sequence 1: | NP_523959.2 | Gene: | smid / 38824 | FlyBaseID: | FBgn0016983 | Length: | 944 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_593287.2 | Gene: | cdc48 / 2542744 | PomBaseID: | SPAC1565.08 | Length: | 815 | Species: | Schizosaccharomyces pombe |
Alignment Length: | 708 | Identity: | 243/708 - (34%) |
---|---|---|---|
Similarity: | 360/708 - (50%) | Gaps: | 160/708 - (22%) |
- Green bases have known domain annotations that are detailed below.
Fly 238 KRDLEVQHPTESFRDIGGMDSTLKELCEML-IHIKSPEFYFQLGLLPSRGLLLHGPPGCGKTFLA 301
Fly 302 RAISGQLKMPLMEIPATELIGGISGESEERIREVFDQAIGYSPCVLFIDEIDAIGGNRQWASKDM 366
Fly 367 ERRIVSQLISSLDNLKANEFGQSVVVIAATTRPDVLDPGLRRIGRFDHEIAIHIPSRKERREILR 431
Fly 432 IQCEGLSVDPKLNYDKIAELTPGYVGADLMALVSRAASVAVKRRSMKKFRELHAASEKNMTTVTL 496
Fly 497 DDDEPSEDAGETPVPDSKGEETAKDAEAEQKVDGDKETSAKDKSEGDSPNIETPKKATNGNSSIK 561
Fly 562 SPQKTPKKSAEKPTDAAMDVDNVAPEEPKKAVEQEVDSSSSNDEYYEPTLAELTNFLDNPPEEFA 626
Fly 627 DPNFCLTLIDFVDAIKVMQPSAKREGFITVPDTTWDDIGALEKIREELKLAVLAPVKYPEMLERL 691
Fly 692 GLTAPSGVLLCGPPGCGKTLLAKAIANEAGINFISVKGPELMNMYVGESERAVRACFQRARNSAP 756
Fly 757 CVIFFDEFDSLCPKRSDGGDGNNSGTRIVNQLLTEMDGVEERKGVYILAATNRPDIIDPAILRPG 821
Fly 822 RLDTILYVGFPEQSERTEILKATTKNGKRPVLADDVDLDEIAAQTEGYTGADLAGLVKQASMFSL 886
Fly 887 RQSL--------NNGDTNLDDLC---------VRSQHFQEALQQLRPSVNEQDRKIYD 927 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
smid | NP_523959.2 | Nucleolin_bd | 2..71 | CDD:293330 | |
SpoVK | 271..919 | CDD:223540 | 234/664 (35%) | ||
AAA | 287..418 | CDD:278434 | 58/130 (45%) | ||
P-loop_NTPase | 679..>716 | CDD:304359 | 21/36 (58%) | ||
AAA | 699..830 | CDD:278434 | 80/130 (62%) | ||
cdc48 | NP_593287.2 | CDC48_N | 45..127 | CDD:280513 | |
CDC48 | 58..782 | CDD:273521 | 243/708 (34%) | ||
CDC48_2 | 151..209 | CDD:215011 | |||
AAA | 261..390 | CDD:278434 | 58/131 (44%) | ||
AAA | 534..666 | CDD:278434 | 81/131 (62%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG0464 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0000137 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.810 |