| Sequence 1: | NP_523959.2 | Gene: | smid / 38824 | FlyBaseID: | FBgn0016983 | Length: | 944 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_490816.4 | Gene: | vps-4 / 189590 | WormBaseID: | WBGene00021334 | Length: | 430 | Species: | Caenorhabditis elegans |
| Alignment Length: | 439 | Identity: | 127/439 - (28%) |
|---|---|---|---|
| Similarity: | 184/439 - (41%) | Gaps: | 120/439 - (27%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 530 GDKETSA-KDKSEGDSPNIETPKKATNGNSSIKSPQKTPKKSAEKPTDAAMDVDNVAPEEPKKAV 593
Fly 594 EQEVDSSSSNDEYYEPTLAELTNFLDNPPEEFADPNFCLTLIDFVDAIKVMQPSAKREGFITV-- 656
Fly 657 PDTTWDDIGALEKIREELKLAVLAPVKYPEMLERLGLTAP-SGVLLCGPPGCGKTLLAKAIANEA 720
Fly 721 G-INFISVKGPELMNMYVGESERAVRACFQRARNSAPCVIFFDEFDSLCPKRSDGGDGNNSGTRI 784
Fly 785 VNQLLTEMDGVE-ERKGVYILAATNRPDIIDPAILRPGRLDTILYVGFPEQSERTEILKATTKNG 848
Fly 849 KRPVLADDVDLDEIAAQTEGYTGADLAGLVKQASMFSLRQ------------------------- 888
Fly 889 ------------SLNNGDTNLDDLC---VRSQHFQEALQQLRPSVNEQD 922 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| smid | NP_523959.2 | Nucleolin_bd | 2..71 | CDD:293330 | |
| SpoVK | 271..919 | CDD:223540 | 124/434 (29%) | ||
| AAA | 287..418 | CDD:278434 | |||
| P-loop_NTPase | 679..>716 | CDD:304359 | 16/37 (43%) | ||
| AAA | 699..830 | CDD:278434 | 58/132 (44%) | ||
| vps-4 | NP_490816.4 | MIT_VPS4 | 4..79 | CDD:239141 | 10/39 (26%) |
| P-loop_NTPase | 117..>185 | CDD:304359 | 33/69 (48%) | ||
| AAA | 150..286 | CDD:214640 | 60/139 (43%) | ||
| AAA | 154..284 | CDD:278434 | 58/133 (44%) | ||
| Vps4_C | 365..425 | CDD:286426 | 10/49 (20%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 1 | 0.910 | |||||