Protein Alignment smid and ppgn-1

DIOPT Version :9

• Sequence 1: NP_523959.2
• Gene: smid / 38824
• FlyBaseID: FBgn0016983
• Length: 944
• Species: Drosophila melanogaster
• Sequence 2: NP_500191.3
• Gene: ppgn-1 / 177021
• WormBaseID: WBGene00021425
• Length: 747
• Species: Caenorhabditis elegans
• Alignment Length: 591
• Identity: 141/591 - (23%)
• Similarity: 228/591 - (38%)
• Gaps: 189/591 - (31%)

  Fly   464 VSRAASVAVKRRSMKKFRELHAASEKNMTTVTLDDDEPSEDAGETPVP--------DSKGEETAK 520
            ::|.::|.....|.::|.:...|..|          |.|.:|.::|..        .|||....|
 Worm    24 INRFSTVLPHILSARRFPQRRPARPK----------EESSEAEKSPPKRWEFEISWSSKGHRETK 78

  Fly   521 DAEAEQKVDGDKETSAKDKSEGDSPNIETPKKATNGNSSIKSPQK-------------------- 565
                         :.||..|||:...        .||.....|:|
 Worm    79 -------------SDAKSASEGNENG--------GGNKGDNDPRKQLMEKMKRWLAISLFAYGIL 122

  Fly   566 ---TPKKSAEKPTDAAMDVDNVAPEE-----------------PKKAVE----QEVDSSSSNDE- 605
               :||.:      ||:..|.::..|                 |:|.|.    .:..:.:|..|
 Worm   123 FILSPKGA------AAVTADKISWSEFINELLPTGQVYRIIILPEKDVAYLYCYDTGAKNSRGEK 181

  Fly   606 ---YYEPTLAELTNF----------LDNPPEEFADPNFCLTLIDFVDAIKVMQ------------ 645
               .|...:..:..|          |..|||.:       |.|::..:..|.|
 Worm   182 LASMYRVGIPSVARFETEVRAAEAALGLPPEHW-------TQIEYRRSENVAQWFTIIVLGGLLL 239

  Fly   646 ------------------PSAKREGFITVPD-----------TTWDDIGALEKIREELKLAVLAP 681
                              .|...:|..|:.|           ..:.|:....:.:.|:: ..:..
 Worm   240 GGFVLFRKFKGSFNMSDMMSNMTKGKFTIIDPHSVEGKKQLKIKFKDVAGCSEAKVEIR-EFVDY 303

  Fly   682 VKYPEMLERLGLTAPSGVLLCGPPGCGKTLLAKAIANEAGINFISVKGPELMNMYVGESERAVRA 746
            :|.|....:||...|.|.||.|||||||||||||:|.|:.:.|||:.|.|.:.:..|.....:|.
 Worm   304 LKNPGRFTKLGAKLPRGALLTGPPGCGKTLLAKALAAESTVPFISMNGSEFVEVIGGLGASRIRG 368

  Fly   747 CFQRARNSAPCVIFFDEFDSLCPKRSDG-------GDGNNSGTRIVNQLLTEMDGVEERKGVYIL 804
            .|:.||:.|||:|:.||.|::..|||:|       |.|:....:.:||||.||||:....||.:|
 Worm   369 LFKEARSRAPCIIYIDEIDAIGRKRSEGAGAGGGFGGGSGEEEQTLNQLLVEMDGMGSGNGVVVL 433

  Fly   805 AATNRPDIIDPAILRPGRLDTILYVGFPEQSERTEILKATTKNGKRPVLADDVDLD--------E 861
            |:|||.|::|.|:|||||.|..:.:..|...||.::.:...:.         :.||        .
 Worm   434 ASTNRADVLDKALLRPGRFDRHISIDLPTVLERKDMFELYMRK---------IKLDHAPQEYSQR 489

  Fly   862 IAAQTEGYTGADLAGLVKQASMFSLRQSLNNGDTNLDDLC--VRSQHFQEALQQLRPSVNEQDRK 924
            :||.|.|:||||:..:..::   ::|.:.|.        |  |..:..:.||.::.....::.|.
 Worm   490 LAALTPGFTGADIMNVCNES---AIRAASNK--------CHVVTHKDMEYALDRVLAGSEKRSRS 543

  Fly   925 IYDKLR 930
            :.::.|
 Worm   544 LVEEER 549

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
smid	NP_523959.2	Nucleolin_bd	2..71	CDD:293330
		SpoVK	271..919	CDD:223540	139/578 (24%)
		AAA	287..418	CDD:278434
		P-loop_NTPase	679..>716	CDD:304359	20/36 (56%)
		AAA	699..830	CDD:278434	64/137 (47%)
ppgn-1	NP_500191.3	FtsH_ext	111..212	CDD:377663	15/106 (14%)
		FtsH_fam	277..725	CDD:273520	93/294 (32%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	2	1.910