Protein Alignment smid and ymel-1

DIOPT Version :9

• Sequence 1: NP_523959.2
• Gene: smid / 38824
• FlyBaseID: FBgn0016983
• Length: 944
• Species: Drosophila melanogaster
• Sequence 2: NP_001366715.1
• Gene: ymel-1 / 176460
• WormBaseID: WBGene00010842
• Length: 723
• Species: Caenorhabditis elegans
• Alignment Length: 460
• Identity: 129/460 - (28%)
• Similarity: 202/460 - (43%)
• Gaps: 99/460 - (21%)

  Fly   443 LNYDKIAELTPGYVGADLMALVSRAASVAVKRRSMKKFRELHAASEKNMTTVTLDDDEPSEDAGE 507
            ||||..           ::.::..::|..::||..:..::........         :|::|..:
 Worm    85 LNYDDA-----------VVRIIPASSSFYIQRRGFRTRKQTFGVGNAG---------KPTQDEVK 129

  Fly   508 TPVPDSKGEETAKDAEAEQKVDGDKETSAKDKSEGDSPNIETPKKATNGNSSIKSPQKTPKKSAE 572
            :|:           ....:.:.|.|:.:    |||   .:|   |.....|.:|   |.|:....
 Worm   130 SPL-----------TYFSELLAGKKQKT----SEG---GVE---KWNQYESDLK---KLPENQQR 170

  Fly   573 KPTDAAMDVDNVAPEEPKKAVEQEVDSSSSNDEYYEPTLAELTNFLDNPPEEFADPNFCLTLIDF 637
            ..||..:           |.:.....|.:..|.....||.....||          .||:.....
 Worm   171 TYTDGFV-----------KGLLSNGVSGAGKDGKKSNTLTRFYIFL----------VFCIFFGYL 214

  Fly   638 VDAIKVMQPSAKREG-------FITVP--------DTTWDDIGALEKIREELKLAVLAPVKYPEM 687
            ...|:|      |.|       |.:.|        ..|:||:..:::.:.|:: .::..:|.||.
 Worm   215 TGRIRV------RVGDRQIGSLFFSNPQEVNPEDVQVTFDDVRGMDEAKLEVE-EIVDYLKDPEK 272

  Fly   688 LERLGLTAPSGVLLCGPPGCGKTLLAKAIANEAGINFISVKGPELMNMYVGESERAVRACFQRAR 752
            ..|||...|.||||.||||.||||||:|||.||.:.|....|.|...:.||:..|.||..|.:|:
 Worm   273 YSRLGGRLPKGVLLVGPPGTGKTLLARAIAGEAQVPFFHTAGSEFDEVLVGQGARRVRDLFDKAK 337

  Fly   753 NSAPCVIFFDEFDSLCPKRSDGGDGNNS----GTRIVNQLLTEMDGVEERKGVYILAATNRPDII 813
            ..|||:||.||.||:..||.     :||    ..:.:||||:||||....:|:.::|||||.|.:
 Worm   338 ARAPCIIFIDEIDSVGSKRV-----SNSIHPYANQTINQLLSEMDGFTRNEGIIVIAATNRVDDL 397

  Fly   814 DPAILRPGRLDTILYVGFPEQSERTEILKATTKNGKRPVLADDVDLDEIAAQTEGYTGADLAGLV 878
            |.|:|||||.|..:.|..|:.:.|.:|.....   .:.|.:..:|...:|..:.|:||||:..:|
 Worm   398 DKALLRPGRFDVRVTVPKPDLAGRVDIFNFYL---SKIVHSGGIDPKVLAKGSTGFTGADIENMV 459

  Fly   879 KQASM 883
            .||::
 Worm   460 NQAAL 464

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
smid	NP_523959.2	Nucleolin_bd	2..71	CDD:293330
		SpoVK	271..919	CDD:223540	129/460 (28%)
		AAA	287..418	CDD:278434
		P-loop_NTPase	679..>716	CDD:304359	21/36 (58%)
		AAA	699..830	CDD:278434	64/134 (48%)
ymel-1	NP_001366715.1	FtsH_fam	195..685	CDD:273520	103/295 (35%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910