Sequence 1: | NP_523959.2 | Gene: | smid / 38824 | FlyBaseID: | FBgn0016983 | Length: | 944 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_496273.1 | Gene: | cdc-48.1 / 174624 | WormBaseID: | WBGene00007352 | Length: | 809 | Species: | Caenorhabditis elegans |
Alignment Length: | 892 | Identity: | 279/892 - (31%) |
---|---|---|---|
Similarity: | 417/892 - (46%) | Gaps: | 248/892 - (27%) |
- Green bases have known domain annotations that are detailed below.
Fly 125 DENEDDSNTKTTNGDGVAAAAAPPPPTPAVQGSAL----KRLMEEVPEIAVAAKKVAKPNTIHVS 185
Fly 186 SSEAIQKLHQVVGNR-------------AKNLSE----DAVPRSKDHRNVPG------------- 220
Fly 221 LYQQLHQN-----QSRDRLRKF--------------------------KRDLEVQHPTE-SFRDI 253
Fly 254 GGMDSTLKELCEML-IHIKSPEFYFQLGLLPSRGLLLHGPPGCGKTFLARAISGQLKMPLMEIPA 317
Fly 318 TELIGGISGESEERIREVFDQAIGYSPCVLFIDEIDAIGGNRQWASKDMERRIVSQLISSLDNLK 382
Fly 383 ANEFGQSVVVIAATTRPDVLDPGLRRIGRFDHEIAIHIPSRKERREILRIQCEGLSVDPKLNYDK 447
Fly 448 IAELTPGYVGADLMALVSRAASVAVKRRSMKKFRELHAASEKNMTTVTLDDDEPSEDAGETPVPD 512
Fly 513 SKGEETAKDAEAEQKVDGDKETSAKDKSEGDSPNIETPKKATNGNSSIKSPQKTPKKSAEKPTDA 577
Fly 578 AMDVDNVAPEEPKKAVEQEVDSSSSNDEYYEPTLAELTNFLDNPPEEFADPNFCLTLIDFVDAIK 642
Fly 643 VMQPSAKREGFITVPDTTWDDIGALEKIREELKLAVLAPVKYPEMLERLGLTAPSGVLLCGPPGC 707
Fly 708 GKTLLAKAIANEAGINFISVKGPELMNMYVGESERAVRACFQRARNSAPCVIFFDEFDSLCPKRS 772
Fly 773 D--GGDGNNSGTRIVNQLLTEMDGVEERKGVYILAATNRPDIIDPAILRPGRLDTILYVGFPEQS 835
Fly 836 ERTEILKATTKNGKRPVLADDVDLDEIAAQTEGYTGADLAGLVKQASMFSLRQSLN--------- 891
Fly 892 -----NGDTNLDDLCV------RSQHFQEALQQLRPSVNEQDRKIYD 927 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
smid | NP_523959.2 | Nucleolin_bd | 2..71 | CDD:293330 | |
SpoVK | 271..919 | CDD:223540 | 237/669 (35%) | ||
AAA | 287..418 | CDD:278434 | 60/130 (46%) | ||
P-loop_NTPase | 679..>716 | CDD:304359 | 20/36 (56%) | ||
AAA | 699..830 | CDD:278434 | 84/132 (64%) | ||
cdc-48.1 | NP_496273.1 | CDC48_N | 31..112 | CDD:280513 | 18/93 (19%) |
CDC48 | 52..775 | CDD:273521 | 273/869 (31%) | ||
CDC48_2 | 137..197 | CDD:215011 | 6/59 (10%) | ||
AAA | 247..376 | CDD:278434 | 60/131 (46%) | ||
AAA | 520..654 | CDD:278434 | 84/133 (63%) | ||
Vps4_C | <727..771 | CDD:286426 | 12/41 (29%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG0464 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D169540at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000137 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
5 | 4.820 |