DRSC/TRiP Functional Genomics Resources

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Protein Alignment smid and AgaP_AGAP011743

DIOPT Version :9

Sequence 1:NP_523959.2 Gene:smid / 38824 FlyBaseID:FBgn0016983 Length:944 Species:Drosophila melanogaster
Sequence 2:XP_320769.4 Gene:AgaP_AGAP011743 / 1280899 VectorBaseID:AGAP011743 Length:902 Species:Anopheles gambiae


Alignment Length:980 Identity:190/980 - (19%)
Similarity:312/980 - (31%) Gaps:305/980 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   173 AKKVAKPNTIHVSSSEAIQKLHQVVGNRAKNLSEDAVPRSKD----HRNVPGL---YQQLHQNQS 230
            ||.|||   ..:::::.:.  |.:...:...|:|.    :||    ||.|..|   |.||    .
Mosquito     4 AKAVAK---FWITTTDLLD--HVLKHEKRIQLAEP----TKDGRIVHRLVSDLFCRYVQL----C 55

  Fly   231 RDRLRKFKRDLEVQHPTESFRDIGGMDSTLKELCEMLIHIKSPEFYFQLGLLPSRGLLLHGP--- 292
            |...|.:.:.|:||......:.:....:.:.||...|..|:..||.:..|.|..:.|:   |   
Mosquito    56 RSLERCYDQTLQVQKRAVIQQLLEAGQARMLELRTKLQEIELSEFVYVDGALQEQHLI---PDDV 117

  Fly   293 --------PGCGKTFLARAISGQLKMPLMEIPATELIGGISGESEE------------------- 330
                    |......|...:..|...|.:|..:....|..|.|||:                   
Mosquito   118 LAVRPCYFPARRPDELQALLDAQKLPPFIEPGSDAEDGSSSDESEQPEEEQAALNLITAHERARQ 182

  Fly   331 -RIREV-------------FDQAIGYSPCVLF--------------------------IDEIDAI 355
             |:|:.             .|:.|...|...|                          :|:..| 
Mosquito   183 ARVRQTNFRLHPDRYYPKPIDEEIVDVPYEFFYRPGQFMLYPVKRTVYNWDFRMKKKDVDDAAA- 246

  Fly   356 GGNRQWASKDMERRIVSQL------------------ISSLDNLKANEFGQS------------- 389
                :.|..:..:|:...|                  .::|...|.:.|.:|             
Mosquito   247 ----ELAQVEAAKRLEEALERIRLNRAAAKIQRYWRKFNALKAQKKHRFDRSKFLGLFDDYEPKL 307

  Fly   390 -----VVVIAATTRPDVLDPGLRRIGRFDHEIAIHIPSRKERREILRIQCEGLS----------- 438
                 |..:.|..|        .|...||......|...|.|  ||||:...|.           
Mosquito   308 GDALAVAEVRAARR--------ARQPEFDRSFVAAIADEKAR--ILRIRGPALLEDITDFVRAWF 362

  Fly   439 ---VDPKLNYDKIAELTPGYVGADLMALVSRAASVAVKRRSMKKFRELHAASEKNMTTVTLDDDE 500
               .|..|.:|.|.|  |...|..|:          |:..::.....|....:|.:..:...:.:
Mosquito   363 REWYDETLAFDLIPE--PFQGGTVLI----------VRGETLTPLEYLALERQKQLDKLKTPEQK 415

  Fly   501 PSEDAGETPVPDSKGEETAKDAEAEQKVDGD-------KETSAKDKSEGDSPNIETPKKATNGNS 558
            ..|         :...:.||:.|.|:|.:..       :|..|:::.||.:.:...|:..||...
Mosquito   416 KKE---------ADAMKAAKEREQEKKREEKARLKELAREKRARERKEGKTYDFTEPEFMTNAYL 471

  Fly   559 SIKSPQKTPKKS----------AEKPTDAAMDVDNVAPEEPKKAVEQEVDSS-----SSNDEYYE 608
            :::......:|.          .:.|....:.:|..|      .|.||:.:.     .|..|..:
Mosquito   472 TLEETLARYRKDWAFVNELDNLQDLPIMEWITLDKFA------EVHQELHAEVHELLKSERELLQ 530

  Fly   609 PTLAELTNFLDNPP----------------EEFADPNFCLTLIDFVDAI---KVMQPSAKREGFI 654
            ..|.:.......||                :|..||...|::...::.:   .|::...||    
Mosquito   531 MALCKDERMKYKPPKPKKPPRAKGAKGKKRKEPIDPTADLSVESILNELVERNVLKTCRKR---- 591

  Fly   655 TVPDTTWD-DIGALEK--------------IREELK--LAVLAPVKYPEMLERLGLTAPSGVLLC 702
            |..|...| :..|.|:              :|..|:  |..:.|:..|:         |..:.|.
Mosquito   592 TFEDYIGDFNYAAFERRNRLEQDPPPGMGEVRTILQSYLYGMGPLAAPK---------PKSLCLV 647

  Fly   703 GPPGCGKTLLAKAIANEAGINFISVK----GPELMNMYVGESERAVRACFQRARNSAPCVIFFD- 762
            ||||.|||||.:||.||.|.....:.    ||...|......:..:||    ||...|.|:..: 
Mosquito   648 GPPGYGKTLLLEAICNETGSTLFDLSVDTCGPIEPNNMAHFLQLVLRA----ARLLQPSVLAIEG 708

  Fly   763 ---EFDSLCPKRSDGGD----GNNSGTRIVNQLLTEMDGVEERKGVYILAATNRPDIIDPAILRP 820
               .|....|:.....|    |.:....||.||..| |.|       :|..|:.    .|.:.:.
Mosquito   709 VHRGFYKKVPQPEQPLDPAKLGKHLFKLIVKQLKPE-DKV-------LLVGTSD----QPWVAKV 761

  Fly   821 GRL----DTILYVGFPEQSERTEILKATTKNGKRPVLADDVDLDEIAAQTEGYTGADLAGLVKQA 881
            |.|    |.||.:..|:......:.:...:  :.|.:..|:||..:|..|.||:...:....:|.
Mosquito   762 GPLKKCFDKILLLPRPDYGSTVLLWQYALR--RFPTVPRDLDLSALAKVTTGYSAGQILECAQQV 824

  Fly   882 SMFSLRQSLNNGDTNLDDLCVRSQHFQEALQQLRPSVNEQ-------DRKIYDKLRLKYAAPRVP 939
            .....|.........:.:|.   .||........|..:::       .||: |||    |..|..
Mosquito   825 LNIRRRMQFGRKPLQVGELL---DHFLAGTTPQYPIADKEYEKFVKWHRKV-DKL----AKQRAK 881

  Fly   940 TLNDK 944
            .:.::
Mosquito   882 VMRER 886

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
smidNP_523959.2 Nucleolin_bd 2..71 CDD:293330
SpoVK 271..919 CDD:223540 157/841 (19%)
AAA 287..418 CDD:278434 33/236 (14%)
P-loop_NTPase 679..>716 CDD:304359 13/36 (36%)
AAA 699..830 CDD:278434 43/146 (29%)
AgaP_AGAP011743XP_320769.4 AAA 617..>664 CDD:99707 18/55 (33%)
AAA 640..778 CDD:214640 44/162 (27%)
AAA 644..776 CDD:278434 43/147 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0464
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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