DRSC/TRiP Functional Genomics Resources

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Protein Alignment smid and AgaP_AGAP011967

DIOPT Version :9

Sequence 1:NP_523959.2 Gene:smid / 38824 FlyBaseID:FBgn0016983 Length:944 Species:Drosophila melanogaster
Sequence 2:XP_320566.3 Gene:AgaP_AGAP011967 / 1280704 VectorBaseID:AGAP011967 Length:782 Species:Anopheles gambiae


Alignment Length:848 Identity:152/848 - (17%)
Similarity:274/848 - (32%) Gaps:286/848 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   221 LYQQLHQNQSRDRLRKFKRDLEVQHPTESFRDIGGMDSTLKELCEM---LIHIKSPEFYFQLGLL 282
            :|.|:.|.|.|..:||.                  :|:.|..:.|:   |:.|...||.:...::
Mosquito    37 IYDQIVQPQKRILIRKL------------------LDNCLGRMLELKHDLVIIDMTEFSYNDAIV 83

  Fly   283 PSRGLLLHGPPGCGKTFLARAISGQLKMPL-MEIPATELIGGISGESEERIREVFDQAIGYSPCV 346
            ...||                      .|| ||:.....   ...|.||::.|          ..
Mosquito    84 EKLGL----------------------TPLSMEVAVPRY---FRREREEQLNE----------RK 113

  Fly   347 LFIDEI-DAIGGNRQWASKDMERRIVSQLISSLDNLKANEFGQSVVVIAATTRPDVLDPGLRRIG 410
            .|:|:| ..||.        ::..:|.:.:|.|:.::         :|....|        .|.|
Mosquito   114 KFMDDILKKIGA--------LDEEVVEEELSELEAIR---------IIQTHER--------ARQG 153

  Fly   411 RFDHEIAIHIPSRKER--------------REILRIQ--CEGLSVDPKLNYDKIAELTPGYVGAD 459
            |...:....:...||:              ...::||  ..|.:...:....|:.|:.  .:|. 
Mosquito   154 RLRAQFMKELKLLKEKGKPDSSRDKSTTGLNAAMKIQKTWRGYATRRQTRRKKMEEMI--LIGM- 215

  Fly   460 LMALVSRAASVAVKRRSMKKFR--------------------ELHAASEKNMTTVTLDD------ 498
            :.|.|:.|.:...:...:|:||                    |:.......||....|:      
Mosquito   216 VPAPVTSARTALDELEDLKQFRYKQQKTFQDDYERSLVRVKEEISVKQGAAMTEDIADEIRTWFK 280

  Fly   499 ----------DEPSEDAGETPVPDSKGEETAKDAEAEQKVDGDKETSAKDKSEGD---SPNIETP 550
                      |.|||:||                       |.:...::..:|.:   |..:.:.
Mosquito   281 EYQKRTGRLPDFPSEEAG-----------------------GSRHLLSRQGTESEMSRSSVLSSR 322

  Fly   551 KKATNGNSSIKSPQKTP-KKSAEKPTDAAM-DVDNVAPEEPKKAVEQEVDSSSSNDE-------Y 606
            :....|:...|..||.| :.|.|:..|.|. .:.:....|.|..:|:..:.....||       |
Mosquito   323 ESKLKGSGKEKLAQKKPGELSLEEGLDKAFKPMQSSFLPEIKSGIEEYTEVWKGKDESQNLRQTY 387

  Fly   607 YEPTLAELTNFLDNPPEEFADPNFCLTLIDFVDAI---------------------KVMQPSAKR 650
            |:..:.|         |::||....|..|  ||.|                     |.....|:|
Mosquito   388 YDDMIYE---------EKYADVEAELRRI--VDEIMRQELELLQIALERDRGGKKLKKSSKKARR 441

  Fly   651 EG---------FITVPDTTWDDI-------GALEK---------------------------IRE 672
            .|         .:| ||.|.:.:       |.::|                           :|:
Mosquito   442 SGKKGKKKKDKDLT-PDRTTESLFEELVTNGIIKKYPETPIKSYVGDLSYAARSALNPSPGDVRQ 505

  Fly   673 ELKLAVLAPVKYPEMLERLGLTAPSGVLLCGPPGCGKTLLAKAIANEAGINFISVKGPELMNMYV 737
            .:|...:.|:. .|.:...|....| :|:.||.|.|||.|..||..|.|.....:..|.::..|.
Mosquito   506 LIKQYCILPLG-SETIRNFGPCIKS-LLIAGPKGSGKTSLVHAICTETGSVLFDISPPNIVGKYP 568

  Fly   738 GESE--RAVRACFQRARNSAPCVIFFDEFDSLCPKRSDGGDGNNSGTRIVNQLLTEMDGVEERKG 800
            |:|.  ..:....:.:|...|.||:|.:.:....|:....| .....|:...|...:..::....
Mosquito   569 GKSGLIMLMHLISKVSRLLQPSVIYFGDAEKPFMKKIPKTD-RTDPKRLKKDLPKLVKNIQPEDR 632

  Fly   801 VYILAATNRPDIIDPAILRPGRLDT---ILYVGFPEQSERT----EILKATTKNGKRPVLADDVD 858
            :.::..::.|...|..::    :.|   .:|:..|:....:    |:|...:...::      .|
Mosquito   633 IMLIGTSDCPWEGDMKLM----VQTYQRFIYIPRPDYGALSFAWKELLSHYSGVHRQ------FD 687

  Fly   859 LDEIAAQTEGYTGADLAGLVKQA----SMFSLRQSLNNGDTNLDDLCVRSQHFQEALQQLRPSVN 919
            ...:|..::|||...:...:::.    .|..||.   :..|:|:.:        .||..|.|...
Mosquito   688 TGAMAKISDGYTIGSVVRCIREVITCKRMLQLRV---HPLTHLELI--------NALSALEPVYK 741

  Fly   920 EQD 922
            |::
Mosquito   742 EEE 744

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
smidNP_523959.2 Nucleolin_bd 2..71 CDD:293330
SpoVK 271..919 CDD:223540 139/790 (18%)
AAA 287..418 CDD:278434 22/132 (17%)
P-loop_NTPase 679..>716 CDD:304359 12/36 (33%)
AAA 699..830 CDD:278434 29/135 (21%)
AgaP_AGAP011967XP_320566.3 SpoVK <454..745 CDD:223540 59/316 (19%)
P-loop_NTPase 530..639 CDD:304359 25/109 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0464
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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