DRSC/TRiP Functional Genomics Resources

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Protein Alignment smid and AgaP_AGAP006205

DIOPT Version :9

Sequence 1:NP_523959.2 Gene:smid / 38824 FlyBaseID:FBgn0016983 Length:944 Species:Drosophila melanogaster
Sequence 2:XP_316268.4 Gene:AgaP_AGAP006205 / 1276867 VectorBaseID:AGAP006205 Length:1020 Species:Anopheles gambiae


Alignment Length:1046 Identity:491/1046 - (46%)
Similarity:634/1046 - (60%) Gaps:148/1046 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 KKAKPLLHDHLITIRVKKYLEEHIGETYLDVKQMTRELMQKYPEYSRRKFGPFRQLVHQAFSIIS 66
            :|..|..:|.:|..|||:||||::.:||:|...|.|||.|:|.||:|||..|||.||.:|:..:.
Mosquito     3 RKTSPFPYDPMIIPRVKQYLEENVHQTYVDTGVMARELQQRYREYNRRKANPFRLLVEEAYRTVL 67

  Fly    67 ESYNLDKVSSSE-EDCVSEDSEPPPTNSVMNNMMN---SLYSQPRKPLA-----PKP-------I 115
            .||.||...||| |:....|.|....::..|.|.|   |:|...|...|     |.|       .
Mosquito    68 HSYGLDSNPSSEVEEEAGSDVEVMDESAQRNQMSNTLTSMYMNNRARAAGGGGPPVPDQSGSGAA 132

  Fly   116 SEPIDISSGDENEDDSNTKTTNGDGVAAAAAPPPPTPAVQGSALKRLMEEVPEIAVAAKKVAK-- 178
            .:.||||| ||.|.:.......|:|               ||  |:..|.|.|.....:|..:  
Mosquito   133 GDAIDISS-DEEEGEGGGGGGEGEG---------------GS--KKATEAVSESVSGGEKFVQKF 179

  Fly   179 -PNTIHVSSSEAIQKLHQV----------------VGNRAKNLSEDAVPRSKDHR----NVPGLY 222
             ....||:    :.||.:|                |||.    .|...|.||..|    |..||.
Mosquito   180 VAGNRHVT----VTKLTRVNKTARDDDTSNGSVESVGNG----GEKFPPLSKRRRLELANSGGLV 236

  Fly   223 ------------------------QQLHQNQS-----------------RDRLRKFKRDLEVQHP 246
                                    .:.|..|:                 ..|.:||::::..:..
Mosquito   237 AGATNGQASRHPAGSGSKASHKPTNEQHNQQAGSGTPATPAAASSSAAGGQRSKKFRKEIVPRMV 301

  Fly   247 TESFRDIGGMDSTLKELCEMLIHIKSPEFYFQLGLLPSRGLLLHGPPGCGKTFLARAISGQLKMP 311
            ..:|.|:||||..||.|||:|:|:..||.|..|||.|.||.|||||||.|||.||:||:|||.:.
Mosquito   302 DITFDDVGGMDHILKNLCELLLHVIHPEIYRYLGLPPPRGFLLHGPPGSGKTLLAQAIAGQLNVR 366

  Fly   312 LMEIPATELIGGISGESEERIREVFDQAIGYSPCVLFIDEIDAIGGNRQWASKDMERRIVSQLIS 376
            |:|:|||||:.|:|||||||||:||:||...|||||||||||||..||..|.||||||||:||:|
Mosquito   367 LIEVPATELVAGVSGESEERIRDVFEQAASLSPCVLFIDEIDAISSNRVNAQKDMERRIVAQLLS 431

  Fly   377 SLDNLKANEFGQSVVVIAATTRPDVLDPGLRRIGRFDHEIAIHIPSRKERREILRIQCEGLSVDP 441
            |:|.|...|.|:.|:||.||.|.|.|||.|||:||||.||::.||.|:.|::||||.|..|.:..
Mosquito   432 SMDALGKQEGGEGVIVIGATNRADALDPALRRVGRFDQEISLGIPDREARKQILRIICWKLRISD 496

  Fly   442 KLNYDKIAELTPGYVGADLMALVSRAASVAVKRRS--------MKKFRELHAASEKNMTTVTLDD 498
            .::|.::|:||||||||||:||..|||:.|:||::        ..:..|..|..|.:..|...:.
Mosquito   497 TIDYGELAKLTPGYVGADLLALAIRAANNAIKRKNEPEQGVADSTQITEPVAPVEPDAATAPTET 561

  Fly   499 DEPSEDAGETPVPDSKGEETAKDAEAEQ-KVDGDK-ETSAKDKSEGDSPNIETPKKATNGNSSI- 560
            ...:|.|.......::.:.|..||:||: .||.|: .|::..:...|:...|..|:.|...|.| 
Mosquito   562 TTETEPAAAASSEKTQEKVTTNDADAEKMDVDSDQLPTASTVEPPVDTAVAEAEKQVTVEQSDIA 626

  Fly   561 ----KSPQKTPKKSAEKPTDAAMDVDNVAPEEPKKA--VEQEVDSSSSNDEYYEPTLAELTNFLD 619
                ||..:|.:: ||..|...:.    |.|.||:|  .:..|...||..:..|.||.:|.:.|.
Mosquito   627 MEETKSDNQTTEQ-AESSTTRVVP----AEEAPKEADGADTTVSKPSSVPQKQELTLQQLLDLLL 686

  Fly   620 NPPEEFADP-----NFCLTLIDFVDAIKVMQPSAKREGFITVPDTTWDDIGALEKIREELKLAVL 679
            |  ::.|.|     ..|:...||::|:|.:||||||||||||||.||:|||:|..||||||||:|
Mosquito   687 N--QQNALPVTKLEGLCIERDDFIEALKTVQPSAKREGFITVPDVTWNDIGSLGDIREELKLAIL 749

  Fly   680 APVKYPEMLERLGLTAPSGVLLCGPPGCGKTLLAKAIANEAGINFISVKGPELMNMYVGESERAV 744
            ||||:|..|:.|||||||||||||||||||||||||:||||||||||||||||:|||||||||||
Mosquito   750 APVKFPHRLKLLGLTAPSGVLLCGPPGCGKTLLAKAVANEAGINFISVKGPELLNMYVGESERAV 814

  Fly   745 RACFQRARNSAPCVIFFDEFDSLCPKRSDGGDGNNSGTRIVNQLLTEMDGVEERKGVYILAATNR 809
            |.|||||||||||||||||||||||||||..:| ::|||:||||||||||:||||||:::|||||
Mosquito   815 RQCFQRARNSAPCVIFFDEFDSLCPKRSDTAEG-SAGTRVVNQLLTEMDGIEERKGVFLMAATNR 878

  Fly   810 PDIIDPAILRPGRLDTILYVGFPEQSERTEILKATTKNGKRPVLADDVDLDEIAAQTEGYTGADL 874
            |||:|||:|||||||.|||||.|.:.:|.:||:|.|||..:|.|||||:|:::|..|||||||||
Mosquito   879 PDIVDPAVLRPGRLDKILYVGLPAKEDRVDILRALTKNRTQPRLADDVELEKVAELTEGYTGADL 943

  Fly   875 AGLVKQASMFSLRQSL---------NNGDTNLDD---LCVRSQHFQEALQQLRPSVNEQDRKIYD 927
            ||||:|||:.:|:.|:         ..|:||.:|   |.||.:||.:|::.::|||..:|:|.|:
Mosquito   944 AGLVRQASLQTLKDSIVASSLQEETAGGETNAEDELSLMVRFEHFTQAIRNIKPSVTAEDKKHYE 1008

  Fly   928 KLRLKY 933
            ||||||
Mosquito  1009 KLRLKY 1014

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
smidNP_523959.2 Nucleolin_bd 2..71 CDD:293330 33/68 (49%)
SpoVK 271..919 CDD:223540 380/681 (56%)
AAA 287..418 CDD:278434 89/130 (68%)
P-loop_NTPase 679..>716 CDD:304359 31/36 (86%)
AAA 699..830 CDD:278434 113/130 (87%)
AgaP_AGAP006205XP_316268.4 Nucleolin_bd 3..72 CDD:293330 33/68 (49%)
SpoVK 327..1005 CDD:223540 382/685 (56%)
AAA 343..471 CDD:278434 87/127 (69%)
AAA 769..900 CDD:278434 114/131 (87%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 243 1.000 Domainoid score I5040
eggNOG 1 0.900 - - E1_COG0464
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H1902
Inparanoid 1 1.050 829 1.000 Inparanoid score I1352
OMA 1 1.010 - - QHG53526
OrthoDB 1 1.010 - - D169540at33208
OrthoFinder 1 1.000 - - FOG0000137
OrthoInspector 1 1.000 - - otm49711
Panther 1 1.100 - - LDO PTHR23077
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X2802
TreeFam 1 0.960 - -
1312.940

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