Protein Alignment smid and TER94

DIOPT Version :10

• Sequence 1: NP_523959.2
• Gene: smid / 38824
• FlyBaseID: FBgn0016983
• Length: 944
• Species: Drosophila melanogaster
• Sequence 2: XP_315644.3
• Gene: TER94 / 1276315
• VectorBaseID: AGAMI1_004909
• Length: 804
• Species: Anopheles gambiae
• Alignment Length: 936
• Identity: 291/936 - (31%)
• Similarity: 435/936 - (46%)
• Gaps: 252/936 - (26%)

  Fly    48 RRKFGPFRQLVHQAF----SIISESY-NLDKVSSSEEDCVSEDSEPPPTNSVMNNMMNSLYSQPR 107
            :||..|.|.:|.:|.    |:||.|. .:|::.....|.|                  .|..:.|
Mosquito    15 KRKDRPNRLIVDEAANDDNSVISLSQAKMDELELFRGDTV------------------LLKGKRR 61

  Fly   108 KPLAPKPISEPIDISSGDENEDD----------SNTKTTNGDGVAAAAAPP----------PPTP 152
            |        |.:.|...|||..|          :|.:...||.|...:.|.          |...
Mosquito    62 K--------ETVCIVLSDENCPDEKIRMNRVVRNNLRVWLGDVVMIQSCPDVKYGKRVHILPIDD 118

  Fly   153 AVQGSALKRLMEEV---PEIAVAAKKVAKPNTIHVSSSEAIQKLHQVVGNRA---KNLSED---- 207
            .|:|  |...:.:|   |....|.:.:.|.:|..|..           |.||   |.::.|
Mosquito   119 TVEG--LSGNLFDVYLKPYFLEAYRPIHKDDTFIVRG-----------GMRAVEFKVVAADPEPY 170

  Fly   208 --AVPRSKDHRNVPGLYQQLHQNQSRDRLRKFKRDLEVQHPTESFRDIGGMDSTLKELCEML-IH 269
              ..|.:..|  ..|  ..:.:.:..:.|.....|           ||||....|.::.||: :.
Mosquito   171 CIVAPETVIH--CEG--NPIKREEEEETLNAVGYD-----------DIGGCRKQLAQIKEMVELP 220

  Fly   270 IKSPEFYFQLGLLPSRGLLLHGPPGCGKTFLARAISGQLKMPLMEIPATELIGGISGESEERIRE 334
            ::.|..:..:|:.|.||:|::||||.|||.:|||::.:.......|...|::..::||||..:|:
Mosquito   221 LRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRK 285

  Fly   335 VFDQAIGYSPCVLFIDEIDAIGGNRQWASKDMERRIVSQLISSLDNLKANEFGQSVVVIAATTRP 399
            .|::|...||.::||||||||...|:....::||||||||::.:|.:|.:   ..|:|:|||.||
Mosquito   286 AFEEAEKNSPAIIFIDEIDAIAPKREKTHGEVERRIVSQLLTLMDGMKKS---SHVIVMAATNRP 347

  Fly   400 DVLDPGLRRIGRFDHEIAIHIPSRKERREILRIQCEGLSVDPKLNYDKIAELTPGYVGADLMALV 464
            :.:||.|||.||||.||.|.||....|.|:|||..:.:.:...::.::||..:.|:|||||.:|.
Mosquito   348 NSIDPALRRFGRFDREIDIGIPDATGRLEVLRIHTKNMKLADDVDLEQIAAESHGHVGADLASLC 412

  Fly   465 SRAASVAVKRRSMKKFRELHAASEKNMTTVTLDDDEPSEDAGETPVPDSKGEETAKDAEAEQKVD 529
            |.||        :::.||       .|..:.|:||
Mosquito   413 SEAA--------LQQIRE-------KMDLIDLEDD------------------------------ 432

  Fly   530 GDKETSAKDKSEGDSPNIETPKKATNGNSSIKSPQKTPKKSAEKPTDAAMDVDNVAPEEPKKAVE 594
                                                                             
Mosquito   433 ----------------------------------------------------------------- 432

  Fly   595 QEVDSSSSNDEYYEPTLAELTNFLDNPPEEFADPNFCLTLIDFVDAIKVMQPSAKREGFITVPDT 659
             ::|             ||:.|.|            .:::.:|..|:....|||.||..:.||:|
Mosquito   433 -QID-------------AEVLNSL------------AVSMENFRYAMTKSSPSALRETVVEVPNT 471

  Fly   660 TWDDIGALEKIREELKLAVLAPVKYPEMLERLGLTAPSGVLLCGPPGCGKTLLAKAIANEAGINF 724
            ||.|||.||.::.||:..|..||::|:...:.|:....|||..|||||||||||||||||...||
Mosquito   472 TWTDIGGLENVKRELQELVQYPVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANF 536

  Fly   725 ISVKGPELMNMYVGESERAVRACFQRARNSAPCVIFFDEFDSLCPKRSDG-GDGNNSGTRIVNQL 788
            ||||||||:.|:.||||..||..|.:||:::|||:||||.||:...|... ||...:..|::||:
Mosquito   537 ISVKGPELLTMWFGESEANVRDIFDKARSASPCVLFFDELDSIAKSRGGNVGDAGGAADRVINQI 601

  Fly   789 LTEMDGVEERKGVYILAATNRPDIIDPAILRPGRLDTILYVGFPEQSERTEILKATTKNGKRPVL 853
            ||||||:..:|.|:|:.|||||||||||||||||||.::|:..|::..|..||:|..:  |.||
Mosquito   602 LTEMDGMGAKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSREAILRANLR--KSPV- 663

  Fly   854 ADDVDLDEIAAQTEGYTGADLAGLVKQASMFSLRQSL-------------NNGDTNLDDLC---- 901
            |:||||:.:|..|:|::||||..:.::|...::||::             .|...::|:..
Mosquito   664 AEDVDLNYVAKVTQGFSGADLTEICQRACKLAIRQAIEAEIRRERDRAASQNAAMDMDEEDPVPE 728

  Fly   902 VRSQHFQEALQQLRPSVNEQDRKIYD 927
            :...||:||::..|.||::.|.:.|:
Mosquito   729 ITRDHFEEAMKFARRSVSDNDIRKYE 754

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
smid	NP_523959.2	Nucleolin_bd	2..71	CDD:465247	10/27 (37%)
		CDC48	<242..933	CDD:273521	244/705 (35%)
TER94	XP_315644.3	CDC48	22..762	CDD:273521	288/929 (31%)