Protein Alignment SMSr and sgms2b

DIOPT Version :10

• Sequence 1: NP_648114.1
• Gene: SMSr / 38823
• FlyBaseID: FBgn0052380
• Length: 600
• Species: Drosophila melanogaster
• Sequence 2: NP_001003641.1
• Gene: sgms2b / 445247
• ZFINID: ZDB-GENE-040801-162
• Length: 373
• Species: Danio rerio
• Alignment Length: 327
• Identity: 129/327 - (39%)
• Similarity: 182/327 - (55%)
• Gaps: 47/327 - (14%)

  Fly   161 PPSSSTCPCPQAECPSYVSDCD--------TYLRMGGRYV------------PPEYFKTAMSLGY 205
            ||:..|.|.......|.|.|..        ..:|....||            |.|::||    |.
Zfish    33 PPTGRTHPYQDTPPFSQVDDKPKDSKQRGFRRIRKNQDYVHITMAKSSTSRLPSEWWKT----GI 93

  Fly   206 SFVVTW------ITSLTMVIVHERVPDMKRYPPLPDIFLDNVPHIPWAFNMCEITGSLLFTIWVV 264
            :|:  |      :|:..:.|||:||||....|||||.|.|.||...|||.:.|:.|.:|..:|.:
Zfish    94 AFI--WACFNLVLTTAMITIVHDRVPDKSVSPPLPDKFFDYVPRKEWAFRVTEVFGMILVVLWFI 156

  Fly   265 VLTFHKYRLVLLRRFFALAGTVFLLRCVTMLITSLSVPGTHLQCSQKDFAIDDPNVDMVGALIIR 329
            .....|||.::.||||.|.|.:::.|.|||.||:|.||..|::|:.|   :.:.:.:       :
Zfish   157 QWLSLKYRAIVGRRFFFLQGLLYMYRMVTMYITTLPVPSMHMECAPK---LQNNSYE-------K 211

  Fly   330 MSRAYRIWSGLGMSIQGV-RTCGDYMFSGHTVALTLLNFFITEYTPRNLYF--LHTLTWLLNMFG 391
            :.|||::.:|.|:||.|. |.|||:::|||||.|||...||.||:||:..:  .|.:..||:..|
Zfish   212 LQRAYQLVTGAGLSITGSHRMCGDFLYSGHTVMLTLTFLFIYEYSPRSRLWTVYHVICGLLSAMG 276

  Fly   392 IFFILAAHEHYSIDVFVAFYITSRLFLYYHTLANNRALMQS-DSKRTRVWFP-MFSYFESSVDGM 454
            :..||..|||||:||.||:|||||||.:|||:|||:||..| .:..:|||:. |||:.|.:|...
Zfish   277 MICILMGHEHYSLDVVVAYYITSRLFYWYHTMANNQALRGSPHNYLSRVWWNFMFSFLEKNVKLP 341

  Fly   455 VP 456
            ||
Zfish   342 VP 343

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SMSr	NP_648114.1	SAM_SGMS1-like	55..126	CDD:188914
		PAP2_C	349..422	CDD:464150	40/74 (54%)
sgms2b	NP_001003641.1	PAP2_C	232..307	CDD:464150	40/74 (54%)