Protein Alignment SMSr and Sgms1

DIOPT Version :10

• Sequence 1: NP_648114.1
• Gene: SMSr / 38823
• FlyBaseID: FBgn0052380
• Length: 600
• Species: Drosophila melanogaster
• Sequence 2: NP_852051.2
• Gene: Sgms1 / 353229
• RGDID: 727912
• Length: 419
• Species: Rattus norvegicus
• Alignment Length: 458
• Identity: 153/458 - (33%)
• Similarity: 229/458 - (50%)
• Gaps: 94/458 - (20%)

  Fly    32 LDAATDKHLTNGSPDPEPVDPLLVAQWSIEN-VTSWATCMEHFSRTLLDCLRQEAIDGEVLLSLT 95
            |.|:|.|.:...||..       ||.|.:|| :..:...:.||:             |:.|::||
  Rat     2 LSASTMKEVVYWSPKK-------VADWLLENAMPEYCEPLGHFT-------------GQDLINLT 46

  Fly    96 EED----------------VRDMRYKLGYKLTFGELKKFWIAVLKLQLLV---KNSSAES-VILG 140
            :||                :.||                 |..||::..:   ||..|.. :.:|
  Rat    47 QEDFTKPPLCRVSSDNGQRLLDM-----------------IETLKMEHHIEAHKNGHANGHLSIG 94

  Fly   141 IECHGNGNSVYMPLASTGCGPPSS-----STCPCPQAECPSYVSDCDTYLRMGGRYVPPEYFKTA 200
            ::......|..:.:...|.  |:.     ...|.|:.|...|               |.|:.||.
  Rat    95 VDIPNPDGSFSIKIKPNGM--PNGFRKEMIKIPMPEPERSQY---------------PMEWGKTL 142

  Fly   201 MSLGYSFVVTWITSLTMVIVHERVPDMKRYPPLPDIFLDNVPHIPWAFNMCEITGSLLFTIWVVV 265
            ::..|:.....:|::.:.:||||||..:..|||||.|.|:...:.|||::|||.|.:|..:|:..
  Rat   143 LAFLYALSCFVLTTVMISVVHERVPPKEVQPPLPDTFFDHFNRVQWAFSICEINGMILVGLWLFQ 207

  Fly   266 LTFHKYRLVLLRRFFALAGTVFLLRCVTMLITSLSVPGTHLQCSQKDFAIDDPNVDMVGALIIRM 330
            ....||:.::.||||.:.||::|.||:||.:|:|.|||.|..||.|.|          |....::
  Rat   208 WLLLKYKSIISRRFFCIVGTLYLYRCITMYVTTLPVPGMHFNCSPKLF----------GDWEAQV 262

  Fly   331 SRAYRIWSGLGMSIQGVRT-CGDYMFSGHTVALTLLNFFITEYTPRNLYFLHTLTWLLNMFGIFF 394
            .|..::.:|.|:||.|... ||||::|||||.|||...||.||:||.|::.|.:.|||::.|||.
  Rat   263 RRIMKLIAGGGLSITGSHNMCGDYLYSGHTVMLTLTYLFIKEYSPRRLWWYHWICWLLSVVGIFC 327

  Fly   395 ILAAHEHYSIDVFVAFYITSRLFLYYHTLANNRALMQSDSKR--TRV-WFPMFSYFESSVDGMVP 456
            ||.||:||::||.||:|||:|||.:|||:||.:.|.::....  .|| |:..|.|||.:|.|:||
  Rat   328 ILLAHDHYTVDVVVAYYITTRLFWWYHTMANQQVLKEASQMNLLARVWWYRPFQYFEKNVQGIVP 392

  Fly   457 NEY 459
            ..|
  Rat   393 RSY 395

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SMSr	NP_648114.1	SAM_SGMS1-like	55..126	CDD:188914	18/87 (21%)
		PAP2_C	349..422	CDD:464150	43/73 (59%)
Sgms1	NP_852051.2	SAM_SGMS1	7..78	CDD:188913	21/107 (20%)
		PAP2_C	282..355	CDD:464150	43/72 (60%)