DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sh3beta and sh3bgr

DIOPT Version :9

Sequence 1:NP_001189057.1 Gene:Sh3beta / 38820 FlyBaseID:FBgn0035772 Length:485 Species:Drosophila melanogaster
Sequence 2:XP_005169739.1 Gene:sh3bgr / 445130 ZFINID:ZDB-GENE-040801-27 Length:230 Species:Danio rerio


Alignment Length:262 Identity:81/262 - (30%)
Similarity:133/262 - (50%) Gaps:42/262 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MVLKVYVSGMSGNKEVKKRQQRVLMILDSKNIKYDTVDITEPGKESEKELMQ-----NKSTSNGG 60
            ||:||:::..||:..:||:||.|:..|::..|.|..:||.  ..|..:..|:     .|..:|| 
Zfish     1 MVIKVFLASSSGSTAIKKKQQDVVGFLEALKIDYAQLDIA--SNEDNRAWMRENVPGEKKPTNG- 62

  Fly    61 TVSDPEPRHPLPPQLFNDDEYCGDYDAFDMANEIDTLEVFLKLA-PADTTAVSTAQIELKQENGD 124
                    .|||||:||::.||||||.|..|.|.:|:..||.|. |..:.....|:...|.:||.
Zfish    63 --------IPLPPQIFNEEMYCGDYDTFFDAKEDNTVYEFLGLTPPPGSKEAQQAENSQKLQNGS 119

  Fly   125 AKKEEAE---TEAEDKKTEAGDGDVDVKEEAAEKAENEDGKDKENSKGEDEDADEENAEQKTETE 186
            ..:|..:   |:.|.|:.|. :||       |..||.|:.::.:|::.:.:|.:||..|...|.|
Zfish   120 VTEEHPDDDTTKIELKEAEQ-NGD-------AHTAELEEDEESKNAETDAQDENEEEEEPAEEEE 176

  Fly   187 ESGDKKTEEKTTDAEGETQEKSEEVDTKEKSEVESTKDDEVGKSEDVKDDEDEKSEIVKDDKENS 251
            ||.....||:..:|||         |..|.:.:.|..:||:     |.::|:|..|:.::::..|
Zfish   177 ESRKPAEEEEQEEAEG---------DKVEDNHLVSEAEDEL-----VSEEEEELRELEEEEEHPS 227

  Fly   252 QD 253
            ::
Zfish   228 EE 229

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sh3betaNP_001189057.1 Thioredoxin_like 1..104 CDD:294274 40/107 (37%)
sh3bgrXP_005169739.1 GRX_SH3BGR 2..97 CDD:239328 39/105 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 79 1.000 Domainoid score I8583
eggNOG 1 0.900 - - E1_KOG4023
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 81 1.000 Inparanoid score I5187
OMA 1 1.010 - - QHG46667
OrthoDB 1 1.010 - - D1508713at2759
OrthoFinder 1 1.000 - - FOG0000625
OrthoInspector 1 1.000 - - otm26267
orthoMCL 1 0.900 - - OOG6_110742
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4755
SonicParanoid 1 1.000 - - X4396
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1413.770

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