DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sh3beta and Sh3bgrl4

DIOPT Version :10

Sequence 1:NP_001189057.1 Gene:Sh3beta / 38820 FlyBaseID:FBgn0035772 Length:485 Species:Drosophila melanogaster
Sequence 2:XP_038956330.1 Gene:Sh3bgrl4 / 367869 RGDID:1562039 Length:97 Species:Rattus norvegicus


Alignment Length:99 Identity:35/99 - (35%)
Similarity:57/99 - (57%) Gaps:12/99 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 VYVSGMSGNKEVKKRQQRVLMILDSKNIKYDTVDITEPGKESEKELMQNKSTSNGGTVSDPEPRH 69
            :|.:.:||::|:|:||:.|:.:||...|||:.:||.     ...|:::...|.    |:.|:   
  Rat     6 IYYASVSGSREIKQRQEEVMRVLDIYKIKYELIDIA-----VSTEVLEEMRTK----VASPK--- 58

  Fly    70 PLPPQLFNDDEYCGDYDAFDMANEIDTLEVFLKL 103
            .:|||:||..|||||:..|..|.|...:..|||:
  Rat    59 AIPPQIFNGQEYCGDFIRFHDAKENKEILKFLKM 92

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sh3betaNP_001189057.1 Protein Disulfide Oxidoreductases and Other Proteins with a Thioredoxin fold 1..104 CDD:469754 35/99 (35%)
2A1904 <138..392 CDD:273344
Sh3bgrl4XP_038956330.1 GRX_SH3BGR 4..92 CDD:239328 34/97 (35%)
Blue background indicates that the domain is not in the aligned region.

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