DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sh3beta and GET1-SH3BGR

DIOPT Version :10

Sequence 1:NP_001189057.1 Gene:Sh3beta / 38820 FlyBaseID:FBgn0035772 Length:485 Species:Drosophila melanogaster
Sequence 2:NP_001304673.1 Gene:GET1-SH3BGR / 106865373 HGNCID:54635 Length:273 Species:Homo sapiens


Alignment Length:177 Identity:59/177 - (33%)
Similarity:95/177 - (53%) Gaps:28/177 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 EVKKRQQRVLMILDSKNIKYDTVDITEPGKESEKELMQ-----NKSTSNGGTVSDPEPRHPLPPQ 74
            :::|:||.|:..|::..|.:..:||.  |.|..:..|:     .|...||         .|||||
Human   112 QIRKKQQEVVGFLEANKIDFKELDIA--GDEDNRRWMRENVPGEKKPQNG---------IPLPPQ 165

  Fly    75 LFNDDEYCGDYDAFDMANEIDTLEVFLKLAPADTTAVSTAQIELKQENG--DAKKEEAE-----T 132
            :||:::||||:|:|..|.|.:.:..||.|||...:..|    |..:|.|  :|:||.:|     .
Human   166 IFNEEQYCGDFDSFFSAKEENIIYSFLGLAPPPDSKGS----EKAEEGGETEAQKEGSEDVGNLP 226

  Fly   133 EAEDKKTEAGDGDVDVKEE-AAEKAENEDGKDKENSKGEDEDADEEN 178
            ||::|..|.|:...:..|| |.|.||.|..:::|.::||:...||::
Human   227 EAQEKNEEEGETATEETEEIAMEGAEGEAEEEEETAEGEEPGEDEDS 273

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sh3betaNP_001189057.1 Protein Disulfide Oxidoreductases and Other Proteins with a Thioredoxin fold 1..104 CDD:469754 31/93 (33%)
2A1904 <138..392 CDD:273344 14/42 (33%)
GET1-SH3BGRNP_001304673.1 CHD5 17..>111 CDD:427938
Protein Disulfide Oxidoreductases and Other Proteins with a Thioredoxin fold 112..195 CDD:469754 31/93 (33%)
Blue background indicates that the domain is not in the aligned region.

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