DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sec63 and obe

DIOPT Version :9

Sequence 1:NP_648111.1 Gene:Sec63 / 38819 FlyBaseID:FBgn0035771 Length:753 Species:Drosophila melanogaster
Sequence 2:NP_650472.2 Gene:obe / 41891 FlyBaseID:FBgn0038344 Length:2183 Species:Drosophila melanogaster


Alignment Length:668 Identity:130/668 - (19%)
Similarity:212/668 - (31%) Gaps:270/668 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly    99 YEMASFDPF----EILNVPPTSSQAEI-------KKA-------------------YYRLSKVLH 133
            |:...:|||    .:|.|.|....|||       |:|                   ||:|.    
  Fly  1724 YKKFLYDPFPVESSLLGVLPEHINAEIVAGTVQSKQAALDYLTWTYFFRRLLRNPSYYQLQ---- 1784

  Fly   134 PDKETGDEKSFMMLSKAYQALTDDVAKENYEKYGNPDGPGAMSFGIALPSWIVEKENSVWVLGLY 198
             |.|..:..:||         ::.|.:..||              ::..:.:||::..:      
  Fly  1785 -DIEPENVNNFM---------SNLVERVVYE--------------LSAAACLVERDGCL------ 1819

  Fly   199 GLVFMVAMPSAVGVWWYRSIRFSGDKVLLDTTQMYFYFIHKT---------PHMLLKRALMVLAA 254
                   :|:.:|       |.|.          |:|..::|         |.|..|:.|:.:|.
  Fly  1820 -------IPTFLG-------RISS----------YYYLSYRTMKHFLEDLQPGMNTKKVLLAIAD 1860

  Fly   255 SLEFDK---RHNSQVQERQSDNDEVPALIRQLPNLNEKCKEHPLCRMYSIKARAILHAHLSRMPL 316
            |.|||:   |||     ....|:|:..:.|..|..:.....:       .|...:|.||.:|..|
  Fly  1861 SYEFDQLPVRHN-----EDKHNEEMAEVSRFRPPSSSWDSSY-------TKTFLLLQAHFARQSL 1913

  Fly   317 NPETLERDRQFVVKKCPYLVQEMVSCVHQLVMMAYARRVPRLPSIETIENCMKMSPMIIQGLWEF 381
            .......|.:..:.....::|.||.         |......|.:...::..|:   .:||..|..
  Fly  1914 PNSDYLTDTKSALDNATRVMQAMVD---------YTAERGWLSTTLVVQQLMQ---SVIQARWFD 1966

  Fly   382 KSPLLQLPHLTEDHLYFMNKKRHVKNLQQFAQLKPEE----SRQLLKNLSDFEYENTMKVLGKMP 442
            .|..|.||.:.||            ||..|..:..::    :..:||.|...|||    ||.| |
  Fly  1967 GSEFLTLPGVNED------------NLDAFLNIPHDDYDYLTLPVLKELCKQEYE----VLAK-P 2014

  Fly   443 LIDFSIRCEVIDDENTNVVTAGAIVTVTVTLERKDMKTLFGDTKAPEKQGIKDETNEEAAGDEDE 507
            |.|.....|:  ::...|:.....:.:.:.:|.:.|:                  ||.|      
  Fly  2015 LRDAFEEHEI--EKMYKVIQDLPEIAIQIFVEGRHME------------------NEYA------ 2053

  Fly   508 AAAAAPVKKASAWAKPRKGGKGKGGKKPAQNQKNQKKVPAKAATTATITASEDQAAAGNSDAESE 572
                                     |:|.                                    
  Fly  2054 -------------------------KRPL------------------------------------ 2057

  Fly   573 AGNADGSDVESAAGSGSEDEEKGKNNSSLDDDDDEEWERLQAKLN-------KRERLEGKSR--- 627
                                       ||.||...||..|.|..:       :|..:.|:.|   
  Fly  2058 ---------------------------SLSDDTRGEWMSLHANEDYVLIVNLQRLNVSGQRRGGG 2095

  Fly   628 LSHTVHCPYFPEEKQEYWWTYICDRKSRTLLTAPYHVTNLVEKEEIQLKFTAPRWPGVYTFTVCL 692
            .|:|||||.:|:.|.|.|:..:..:.:..|| |...|:...::...::.|.|....|....|:.|
  Fly  2096 QSYTVHCPKYPKPKNEAWFLTLGSQANDELL-AMKRVSIRGQRCTNRISFQATPRLGRLQLTLYL 2159

  Fly   693 RSDSYLGMDQQQELKLDV 710
            .||..:|.|||.:|:.::
  Fly  2160 MSDCLMGFDQQYDLQFEI 2177

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sec63NP_648111.1 DnaJ 105..164 CDD:278647 19/88 (22%)
SEC63 211..709 CDD:214744 105/523 (20%)
SEEEED 559..>626 CDD:291463 10/73 (14%)
obeNP_650472.2 BRR2 450..1254 CDD:224125
DEAD 488..666 CDD:278688
HELICc 790..866 CDD:197757
Sec63 989..1296 CDD:280962
DEXDc 1332..1532 CDD:214692
DEAD 1338..1510 CDD:278688
HELICc 1605..1704 CDD:197757
SEC63 1818..2176 CDD:214744 106/543 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24075
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

Return to query results.
Submit another query.