DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CTCF and ZNF700

DIOPT Version :9

Sequence 1:NP_648109.1 Gene:CTCF / 38817 FlyBaseID:FBgn0035769 Length:818 Species:Drosophila melanogaster
Sequence 2:NP_001258777.1 Gene:ZNF700 / 90592 HGNCID:25292 Length:745 Species:Homo sapiens


Alignment Length:397 Identity:114/397 - (28%)
Similarity:165/397 - (41%) Gaps:85/397 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   294 YSCPHCPYTASKKFLITRHSRSHDVEPSFKCSICERSFRSNVGLQNHINTHMGNKPHKCKLCESA 358
            |.|..|........|...|.|:|..|..::|..|.:||..:..||.|..||.|.||::|..|:.|
Human   225 YKCKFCGKAFHSFSLYLIHERTHTGEKPYECKQCGKSFTYSATLQIHERTHTGEKPYECSKCDKA 289

  Fly   359 FTTSGELVRHTRYKHTKEKPHKCTECTYASVELTKLRRHMTCHTGERPYQC-------------- 409
            |.:|....||.| .|..|||::|.||..|....:.||||...|:|::||:|              
Human   290 FHSSSSYHRHER-SHMGEKPYQCKECGKAFAYTSSLRRHERTHSGKKPYECKQYGEGLSYLISFQ 353

  Fly   410 ----------PH-CTYASQDMFKLK---RHMVIHTGEKKYQCDICKSRFTQSNSLKAHKLIHSVV 460
                      |: |....:..:..|   .|...|||||:|:|..|...|..|:|.:.|:.||: .
Human   354 THIRMNSGERPYKCKICGKGFYSAKSFQTHEKTHTGEKRYKCKQCGKAFNLSSSFRYHERIHT-G 417

  Fly   461 DKPVFQCNYCPTTCGRKADLRVHIKHMHTSDVPMTCRRCGQQLPDRYQYKLHVKSHEGEKCYSCK 525
            :|| ::|..|.......:.|||| ...||.:.|..|:.||:........::|.::|.|||.|.||
Human   418 EKP-YECKQCGKAFRSASQLRVH-GGTHTGEKPYECKECGKAFRSTSHLRVHGRTHTGEKPYECK 480

  Fly   526 LCSYA----------SVTQRHL------------------------ASHMLIHLDEKPFHCDQCP 556
            .|..|          ..|::|:                        .:|...|..|||:.|:||.
Human   481 ECGKAFRYVKHLQIHERTEKHIRMPSGERPYKCSICEKGFYSAKSFQTHEKTHTGEKPYECNQCG 545

  Fly   557 QAFRQRQLLRRH-------------------MNLVHNEEYQPPEPREKLHKCPSCPREFTHKGNL 602
            :|||....||.|                   .:..|...::.....||.::|..|.:.|:...||
Human   546 KAFRCCNSLRYHERTHTGEKPYECKQCGKAFRSASHLRMHERTHTGEKPYECKQCGKAFSCASNL 610

  Fly   603 MRHMETH 609
            .:|..||
Human   611 RKHGRTH 617

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CTCFNP_648109.1 23ISL <116..206 CDD:293226
C2H2 Zn finger 296..316 CDD:275368 5/19 (26%)
COG5048 321..>621 CDD:227381 106/370 (29%)
zf-C2H2 322..344 CDD:278523 7/21 (33%)
C2H2 Zn finger 324..344 CDD:275368 7/19 (37%)
zf-H2C2_2 337..361 CDD:290200 12/23 (52%)
C2H2 Zn finger 352..373 CDD:275368 8/20 (40%)
C2H2 Zn finger 381..401 CDD:275368 8/19 (42%)
zf-H2C2_2 394..415 CDD:290200 11/45 (24%)
C2H2 Zn finger 409..429 CDD:275368 5/47 (11%)
zf-H2C2_2 422..446 CDD:290200 11/26 (42%)
C2H2 Zn finger 437..457 CDD:275368 6/19 (32%)
C2H2 Zn finger 467..485 CDD:275368 6/17 (35%)
C2H2 Zn finger 496..516 CDD:275370 4/19 (21%)
C2H2 Zn finger 524..544 CDD:275368 7/53 (13%)
zf-H2C2_2 536..561 CDD:290200 11/48 (23%)
C2H2 Zn finger 552..573 CDD:275368 9/39 (23%)
zf-C2H2 587..609 CDD:278523 6/21 (29%)
C2H2 Zn finger 589..609 CDD:275368 6/19 (32%)
ZNF700NP_001258777.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..20
KRAB 27..>69 CDD:214630
KRAB 27..66 CDD:279668
C2H2 Zn finger 169..191 CDD:275368
C2H2 Zn finger 199..219 CDD:275368
COG5048 224..636 CDD:227381 114/397 (29%)
C2H2 Zn finger 227..247 CDD:275368 5/19 (26%)
zf-H2C2_2 243..264 CDD:290200 8/20 (40%)
C2H2 Zn finger 255..275 CDD:275368 7/19 (37%)
zf-H2C2_2 268..292 CDD:290200 12/23 (52%)
C2H2 Zn finger 283..303 CDD:275368 8/20 (40%)
zf-H2C2_2 298..320 CDD:290200 11/22 (50%)
C2H2 Zn finger 311..331 CDD:275368 8/19 (42%)
C2H2 Zn finger 367..387 CDD:275368 3/19 (16%)
zf-H2C2_2 379..403 CDD:290200 9/23 (39%)
C2H2 Zn finger 395..415 CDD:275368 6/19 (32%)
zf-H2C2_2 407..432 CDD:290200 8/26 (31%)
C2H2 Zn finger 423..443 CDD:275368 6/20 (30%)
C2H2 Zn finger 451..471 CDD:275368 4/19 (21%)
zf-H2C2_2 463..488 CDD:290200 10/24 (42%)
C2H2 Zn finger 479..498 CDD:275368 4/18 (22%)
C2H2 Zn finger 513..533 CDD:275368 1/19 (5%)
zf-H2C2_2 525..550 CDD:290200 10/24 (42%)
C2H2 Zn finger 541..561 CDD:275368 9/19 (47%)
zf-H2C2_2 553..578 CDD:290200 3/24 (13%)
C2H2 Zn finger 569..589 CDD:275368 1/19 (5%)
zf-H2C2_2 581..606 CDD:290200 6/24 (25%)
C2H2 Zn finger 597..617 CDD:275368 6/19 (32%)
zf-H2C2_2 609..634 CDD:290200 5/9 (56%)
C2H2 Zn finger 625..645 CDD:275368
zf-H2C2_2 637..660 CDD:290200
C2H2 Zn finger 653..673 CDD:275368
C2H2 Zn finger 681..701 CDD:275368
C2H2 Zn finger 709..729 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
00.000

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