DRSC/TRiP Functional Genomics Resources

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Protein Alignment CTCF and ZFP2

DIOPT Version :9

Sequence 1:NP_648109.1 Gene:CTCF / 38817 FlyBaseID:FBgn0035769 Length:818 Species:Drosophila melanogaster
Sequence 2:NP_085116.2 Gene:ZFP2 / 80108 HGNCID:26138 Length:461 Species:Homo sapiens


Alignment Length:334 Identity:122/334 - (36%)
Similarity:160/334 - (47%) Gaps:14/334 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   277 LKTASSTSQNSNASGHK-YSCPHCPYTASKKFLITRHSRSHDVEPSFKCSICERSFRSNVGLQNH 340
            ::.:|.|......:|.| |.|..|....|:...:|.|.|:|..|..::|..|.::|..|..|..|
Human   140 IERSSLTVHQRIHTGEKPYKCNECGKAFSQSMNLTVHQRTHTGEKPYQCKECGKAFHKNSSLIQH 204

  Fly   341 INTHMGNKPHKCKLCESAFTTSGELVRHTRYKHTKEKPHKCTECTYASVELTKLRRHMTCHTGER 405
            ...|.|.||:||..|..|||.|..|..|.| .||.|||::|.||..|..:...|..|...||||:
Human   205 ERIHTGEKPYKCNECGKAFTQSMNLTVHQR-THTGEKPYECNECGKAFSQSMHLIVHQRSHTGEK 268

  Fly   406 PYQCPHCTYASQDMFKLKRHMVIHTGEKKYQCDICKSRFTQSNSLKAHKLIHSVVDKPVFQCNYC 470
            ||:|..|..|......|..|...|||||.|:|:.|...|:||..|..|:.:||.| || |:||.|
Human   269 PYECSQCGKAFSKSSTLTLHQRNHTGEKPYKCNKCGKSFSQSTYLIEHQRLHSGV-KP-FECNEC 331

  Fly   471 PTTCGRKADLRVHIKHMHTSDVPMTCRRCGQQLPDRYQYKLHVKSHEGEKCYSCKLCSYASVTQR 535
            .....:.:.|..| :.:||.:.|..|..||:....|....:|...|.|||.|.|..|..|.....
Human   332 GKAFSKNSSLTQH-RRIHTGEKPYECMVCGKHFTGRSSLTVHQVIHTGEKPYECNECGKAFSQSA 395

  Fly   536 HLASHMLIHLDEKPFHCDQCPQAFRQRQLLRRHMNLVHNEEYQPPEPREKLHKCPSCPREFTHKG 600
            :|..|..||..|||:.||||.:||.:...|..|         |.....||.::|..|.:.|:...
Human   396 YLIEHQRIHTGEKPYECDQCGKAFIKNSSLTVH---------QRTHTGEKPYQCNECGKAFSRST 451

  Fly   601 NLMRHMETH 609
            ||.||..||
Human   452 NLTRHQRTH 460

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CTCFNP_648109.1 23ISL <116..206 CDD:293226
C2H2 Zn finger 296..316 CDD:275368 6/19 (32%)
COG5048 321..>621 CDD:227381 109/289 (38%)
zf-C2H2 322..344 CDD:278523 6/21 (29%)
C2H2 Zn finger 324..344 CDD:275368 6/19 (32%)
zf-H2C2_2 337..361 CDD:290200 11/23 (48%)
C2H2 Zn finger 352..373 CDD:275368 9/20 (45%)
C2H2 Zn finger 381..401 CDD:275368 6/19 (32%)
zf-H2C2_2 394..415 CDD:290200 10/20 (50%)
C2H2 Zn finger 409..429 CDD:275368 5/19 (26%)
zf-H2C2_2 422..446 CDD:290200 11/23 (48%)
C2H2 Zn finger 437..457 CDD:275368 7/19 (37%)
C2H2 Zn finger 467..485 CDD:275368 5/17 (29%)
C2H2 Zn finger 496..516 CDD:275370 5/19 (26%)
C2H2 Zn finger 524..544 CDD:275368 5/19 (26%)
zf-H2C2_2 536..561 CDD:290200 13/24 (54%)
C2H2 Zn finger 552..573 CDD:275368 8/20 (40%)
zf-C2H2 587..609 CDD:278523 7/21 (33%)
C2H2 Zn finger 589..609 CDD:275368 7/19 (37%)
ZFP2NP_085116.2 COG5048 99..451 CDD:227381 116/323 (36%)
C2H2 Zn finger 104..124 CDD:275368
C2H2 Zn finger 132..152 CDD:275368 2/11 (18%)
C2H2 Zn finger 160..180 CDD:275368 6/19 (32%)
C2H2 Zn finger 188..208 CDD:275368 6/19 (32%)
C2H2 Zn finger 216..236 CDD:275368 9/20 (45%)
C2H2 Zn finger 244..264 CDD:275368 6/19 (32%)
C2H2 Zn finger 272..292 CDD:275368 5/19 (26%)
C2H2 Zn finger 300..320 CDD:275368 7/19 (37%)
C2H2 Zn finger 328..348 CDD:275368 5/20 (25%)
C2H2 Zn finger 356..376 CDD:275368 5/19 (26%)
C2H2 Zn finger 384..404 CDD:275368 5/19 (26%)
C2H2 Zn finger 412..432 CDD:275368 9/28 (32%)
C2H2 Zn finger 440..460 CDD:275368 7/19 (37%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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