DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CTCF and ZNF182

DIOPT Version :9

Sequence 1:NP_648109.1 Gene:CTCF / 38817 FlyBaseID:FBgn0035769 Length:818 Species:Drosophila melanogaster
Sequence 2:NP_001171570.1 Gene:ZNF182 / 7569 HGNCID:13001 Length:639 Species:Homo sapiens


Alignment Length:336 Identity:115/336 - (34%)
Similarity:170/336 - (50%) Gaps:15/336 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   290 SGHK-YSCPHCPYTASKKFLITRHSRSHDVEPSFKCSICERSFRSNVGLQNHINTHMGNKPHKCK 353
            :|.| |.|..|....::|..:..|.::|..|.:::|:.|..||...:.|..|.:||.|.|||:|.
Human   313 TGEKPYECNECGKAFTQKSNLIVHQKTHTGEKTYECTKCGESFIQKLDLIIHHSTHTGKKPHECN 377

  Fly   354 LCESAFTTSGELVRHTRYKHTKEKPHKCTECTYASVELTKLRRHMTCHTGERPYQCPHCTYASQD 418
            .|:..|:....|:.|.| .||.|||||||||..:..|.:.|..|...||||:||:|..|......
Human   378 ECKKTFSDKSTLIIHQR-THTGEKPHKCTECGKSFNEKSTLIVHQRTHTGEKPYECDVCGKTFTQ 441

  Fly   419 MFKLKRHMVIHTGEKKYQCDICKSRFTQSNSLKAHKLIHSVVDKPVFQCNYCPTTCGRKADLRVH 483
            ...|..|...|:|||.::|:.|:..|:|.:.|..|:..|: .:|| ::||.|.....:|:.|.:|
Human   442 KSNLGVHQRTHSGEKPFECNECEKAFSQKSYLMLHQRGHT-GEKP-YECNECEKAFSQKSYLIIH 504

  Fly   484 IKHMHTSDVPMTCRRCGQQLPDRYQYKLHVKSHEGEKCYSCKLCSYASVTQRHLASHMLIHLDEK 548
             :..||.:.|..|..||:...::.:..:|.:.|.|||.|.|.:|..|...:..|..|...|..||
Human   505 -QRTHTEEKPYKCNECGKAFREKSKLIIHQRIHTGEKPYECPVCWKAFSQKSQLIIHQRTHTGEK 568

  Fly   549 PFHCDQCPQAFRQRQLLRRHMNLVHNEEYQPPEPREKLHKCPSCPREFTHKGNLMRHMETH-DDS 612
            |:.|.:|.:|||::.....|         |.....||.:||..|.:.||.|.||:.|..|| ...
Human   569 PYACTECGKAFREKSTFTVH---------QRTHTGEKPYKCTECGKAFTQKSNLIVHQRTHAGKK 624

  Fly   613 ANAREKRRRLK 623
            |:.|...|:.|
Human   625 AHGRGHTRKSK 635

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CTCFNP_648109.1 23ISL <116..206 CDD:293226
C2H2 Zn finger 296..316 CDD:275368 4/19 (21%)
COG5048 321..>621 CDD:227381 104/300 (35%)
zf-C2H2 322..344 CDD:278523 6/21 (29%)
C2H2 Zn finger 324..344 CDD:275368 6/19 (32%)
zf-H2C2_2 337..361 CDD:290200 11/23 (48%)
C2H2 Zn finger 352..373 CDD:275368 6/20 (30%)
C2H2 Zn finger 381..401 CDD:275368 7/19 (37%)
zf-H2C2_2 394..415 CDD:290200 10/20 (50%)
C2H2 Zn finger 409..429 CDD:275368 4/19 (21%)
zf-H2C2_2 422..446 CDD:290200 9/23 (39%)
C2H2 Zn finger 437..457 CDD:275368 6/19 (32%)
C2H2 Zn finger 467..485 CDD:275368 6/17 (35%)
C2H2 Zn finger 496..516 CDD:275370 4/19 (21%)
C2H2 Zn finger 524..544 CDD:275368 5/19 (26%)
zf-H2C2_2 536..561 CDD:290200 10/24 (42%)
C2H2 Zn finger 552..573 CDD:275368 6/20 (30%)
zf-C2H2 587..609 CDD:278523 9/21 (43%)
C2H2 Zn finger 589..609 CDD:275368 8/19 (42%)
ZNF182NP_001171570.1 KRAB 27..85 CDD:214630
KRAB 27..66 CDD:279668
COG5048 147..553 CDD:227381 85/243 (35%)
C2H2 Zn finger 209..228 CDD:275368
C2H2 Zn finger 236..256 CDD:275368
C2H2 Zn finger 264..284 CDD:275368
zf-H2C2_2 277..299 CDD:290200
C2H2 Zn finger 292..312 CDD:275368
zf-H2C2_2 308..329 CDD:290200 5/15 (33%)
C2H2 Zn finger 320..340 CDD:275368 4/19 (21%)
zf-H2C2_2 332..357 CDD:290200 7/24 (29%)
C2H2 Zn finger 348..368 CDD:275368 6/19 (32%)
zf-C2H2 374..396 CDD:278523 7/22 (32%)
C2H2 Zn finger 376..396 CDD:275368 6/20 (30%)
zf-H2C2_2 389..412 CDD:290200 14/23 (61%)
C2H2 Zn finger 404..424 CDD:275368 7/19 (37%)
zf-H2C2_2 417..441 CDD:290200 10/23 (43%)
C2H2 Zn finger 432..452 CDD:275368 4/19 (21%)
zf-H2C2_2 444..469 CDD:290200 9/24 (38%)
C2H2 Zn finger 460..480 CDD:275368 6/19 (32%)
zf-H2C2_2 472..497 CDD:290200 8/26 (31%)
C2H2 Zn finger 488..508 CDD:275368 6/20 (30%)
zf-H2C2_2 500..523 CDD:290200 8/23 (35%)
C2H2 Zn finger 516..536 CDD:275368 4/19 (21%)
zf-H2C2_2 529..553 CDD:290200 9/23 (39%)
C2H2 Zn finger 544..564 CDD:275368 5/19 (26%)
zf-H2C2_2 557..579 CDD:290200 8/21 (38%)
C2H2 Zn finger 572..592 CDD:275368 7/28 (25%)
zf-H2C2_2 587..609 CDD:290200 8/30 (27%)
C2H2 Zn finger 600..620 CDD:275368 8/19 (42%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 619..639 6/17 (35%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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