DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CTCF and Zfp808

DIOPT Version :9

Sequence 1:NP_648109.1 Gene:CTCF / 38817 FlyBaseID:FBgn0035769 Length:818 Species:Drosophila melanogaster
Sequence 2:NP_001034328.2 Gene:Zfp808 / 630579 MGIID:3704127 Length:753 Species:Mus musculus


Alignment Length:351 Identity:124/351 - (35%)
Similarity:170/351 - (48%) Gaps:28/351 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   290 SGHK-YSCPHCPYTASKKFLITRHSRSHDVEPSFKCSICERSFRSNVGLQNHINTHMGNKPHKCK 353
            :|.| |.|..|..|.|:|..:.:|.|.|..|..:||:.|:::|.....||.|..||.|.||:||.
Mouse   240 TGEKPYKCDQCDKTFSEKCHLQKHIRIHTGEKPYKCNQCDKAFSQYSTLQTHRRTHTGEKPYKCN 304

  Fly   354 LCESAFTTSGELVRHTRYKHTKEKPHKCTECTYASVELTKLRRHMTCHTGERPYQCPHCTYASQD 418
            .|:.||:..|.|..|.| .||.|||.||.:|..|..:.:.|:.|...||||:||:|..|..|..:
Mouse   305 QCDKAFSQYGNLQTHRR-THTGEKPFKCNQCDKAFSQYSTLQTHRRTHTGEKPYKCNQCDKAFSE 368

  Fly   419 MFKLKRHMVIHTGEKKYQCDICKSRFTQSNSLKAHKLIHSVVDKPVFQCNYCPTTCGRKADLRVH 483
            ...|:||:.||||||.|:|:.|...|:.:..|..|:..|: .:|| ::||.|.........|:.|
Mouse   369 KCSLQRHIRIHTGEKPYKCNQCNKAFSHNYHLHIHRRTHT-GEKP-YKCNQCDKAFSIHFPLQNH 431

  Fly   484 IKHMHTSDVPMTCRRCGQQLPDRYQYKLHVKSHEGEKCYSCKLCSYASVTQRHLASHMLIHLDEK 548
             |..||.:.|..|.:|.:...::...:.|::.|.|||.|.|..|..|......|.:|..||..||
Mouse   432 -KRTHTGEKPYKCNQCDKAFSEKCHLQNHIRIHTGEKPYKCNQCDKAFSQYFSLQTHRRIHTGEK 495

  Fly   549 PFHCDQCPQAFRQRQLLRRHMNLVHNEEYQPPEPREKLHKCPSCPREFTHKGNLMRHMETHD--- 610
            ||.|:||.:||.|...|:.|.. .|.        .||..||..|.:.|:....|..|..||.   
Mouse   496 PFKCNQCDKAFSQYSTLQTHRR-THT--------GEKPFKCNQCDKAFSKHSTLQSHRRTHSGEK 551

  Fly   611 -------DSA----NAREKRRRLKLG 625
                   |.|    |..:..||...|
Mouse   552 PFKCSQCDKAFSQYNTLQAHRRTHSG 577

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CTCFNP_648109.1 23ISL <116..206 CDD:293226
C2H2 Zn finger 296..316 CDD:275368 7/19 (37%)
COG5048 321..>621 CDD:227381 109/313 (35%)
zf-C2H2 322..344 CDD:278523 7/21 (33%)
C2H2 Zn finger 324..344 CDD:275368 6/19 (32%)
zf-H2C2_2 337..361 CDD:290200 13/23 (57%)
C2H2 Zn finger 352..373 CDD:275368 8/20 (40%)
C2H2 Zn finger 381..401 CDD:275368 5/19 (26%)
zf-H2C2_2 394..415 CDD:290200 10/20 (50%)
C2H2 Zn finger 409..429 CDD:275368 6/19 (32%)
zf-H2C2_2 422..446 CDD:290200 13/23 (57%)
C2H2 Zn finger 437..457 CDD:275368 5/19 (26%)
C2H2 Zn finger 467..485 CDD:275368 5/17 (29%)
C2H2 Zn finger 496..516 CDD:275370 3/19 (16%)
C2H2 Zn finger 524..544 CDD:275368 5/19 (26%)
zf-H2C2_2 536..561 CDD:290200 13/24 (54%)
C2H2 Zn finger 552..573 CDD:275368 8/20 (40%)
zf-C2H2 587..609 CDD:278523 6/21 (29%)
C2H2 Zn finger 589..609 CDD:275368 5/19 (26%)
Zfp808NP_001034328.2 KRAB 4..>45 CDD:214630
KRAB 4..40 CDD:279668
COG5048 <130..284 CDD:227381 16/43 (37%)
C2H2 Zn finger 135..155 CDD:275368
C2H2 Zn finger 163..183 CDD:275368
zf-H2C2_2 175..199 CDD:290200
C2H2 Zn finger 191..211 CDD:275368
zf-H2C2_2 203..227 CDD:290200
C2H2 Zn finger 219..239 CDD:275368
zf-H2C2_2 231..255 CDD:290200 6/14 (43%)
C2H2 Zn finger 247..267 CDD:275368 7/19 (37%)
zf-H2C2_2 259..284 CDD:290200 8/24 (33%)
C2H2 Zn finger 275..295 CDD:275368 6/19 (32%)
zf-H2C2_2 288..312 CDD:290200 13/23 (57%)
C2H2 Zn finger 303..323 CDD:275368 8/20 (40%)
zf-H2C2_2 315..340 CDD:290200 12/25 (48%)
COG5048 327..728 CDD:227381 88/263 (33%)
C2H2 Zn finger 331..351 CDD:275368 5/19 (26%)
zf-H2C2_2 344..367 CDD:290200 11/22 (50%)
C2H2 Zn finger 359..379 CDD:275368 6/19 (32%)
zf-H2C2_2 371..396 CDD:290200 13/24 (54%)
C2H2 Zn finger 387..407 CDD:275368 5/19 (26%)
C2H2 Zn finger 415..435 CDD:275368 6/20 (30%)
zf-H2C2_2 428..451 CDD:290200 8/23 (35%)
C2H2 Zn finger 443..463 CDD:275368 3/19 (16%)
zf-H2C2_2 455..480 CDD:290200 9/24 (38%)
C2H2 Zn finger 471..491 CDD:275368 5/19 (26%)
zf-H2C2_2 483..508 CDD:290200 13/24 (54%)
C2H2 Zn finger 499..519 CDD:275368 8/20 (40%)
zf-H2C2_2 512..535 CDD:290200 8/31 (26%)
C2H2 Zn finger 527..547 CDD:275368 5/19 (26%)
zf-H2C2_2 540..564 CDD:290200 6/23 (26%)
C2H2 Zn finger 555..575 CDD:275368 5/19 (26%)
zf-H2C2_2 568..591 CDD:290200 3/10 (30%)
C2H2 Zn finger 583..603 CDD:275368
zf-H2C2_2 595..620 CDD:290200
C2H2 Zn finger 611..631 CDD:275368
zf-H2C2_2 624..648 CDD:290200
C2H2 Zn finger 639..659 CDD:275368
zf-H2C2_2 652..676 CDD:290200
C2H2 Zn finger 667..687 CDD:275368
zf-H2C2_2 679..703 CDD:290200
C2H2 Zn finger 695..715 CDD:275368
zf-H2C2_2 707..730 CDD:290200
C2H2 Zn finger 723..743 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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