DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CTCF and ZNF71

DIOPT Version :9

Sequence 1:NP_648109.1 Gene:CTCF / 38817 FlyBaseID:FBgn0035769 Length:818 Species:Drosophila melanogaster
Sequence 2:NP_001357144.1 Gene:ZNF71 / 58491 HGNCID:13141 Length:549 Species:Homo sapiens


Alignment Length:577 Identity:157/577 - (27%)
Similarity:224/577 - (38%) Gaps:93/577 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 EEAEEEEEDDEDKY---FIDDEGNCYI---KTTPKKQKELQKKLKQAAAKPGKATRSVVSTATNK 130
            ||.::.|...:|.|   .:::..|...   :|.| :.|||..|...:..|     .|||..||. 
Human    26 EEWQQLEPAQKDLYRDVMLENYRNLVSLDWETRP-EMKELDPKNDISEDK-----LSVVGEATG- 83

  Fly   131 SINLRPAKSTPKATTSKPPPEPKAISVRPARAAAAK--------------------------AKQ 169
                .|.::..:...|:...||.:...||...|.|:                          |.|
Human    84 ----GPTRNGARGPGSEGVWEPGSWPERPRGDAGAEWEPLGIPQGNKLLGGSVPACHELKAFANQ 144

  Fly   170 SAMPPPPAL---VVKVPAPRGRPRKN----PVIPKPEPMDLERELEELVDEPDISSMVTELSDYT 227
            ..:..||.|   ..|...|..|..||    ..:.|| ||..|                 |...|.
Human   145 GCVLVPPRLDDPTEKGACPPVRRGKNFSSTSDLSKP-PMPCE-----------------EKKTYD 191

  Fly   228 VDEAAVEAATATLTPNEAEVYEFEDNATTEDENADKKDVDFVLSNKEVKLKTASSTSQNSNASGH 292
            ..|.....:.::.......::..|            |..:.....|....:::.:..|..:....
Human   192 CSECGKAFSRSSSLIKHQRIHTGE------------KPFECDTCGKHFIERSSLTIHQRVHTGEK 244

  Fly   293 KYSCPHCPYTASKKFLITRHSRSHDVEPSFKCSICERSFRSNVGLQNHINTHMGNKPHKCKLCES 357
            .|:|..|....|::..:|.|.|:|..|..:.|.:|.::||....|..|...|.|.||:.|..|..
Human   245 PYACGDCGKAFSQRMNLTVHQRTHTGEKPYVCDVCGKAFRKTSSLTQHERIHTGEKPYACGDCGK 309

  Fly   358 AFTTSGELVRHTRYKHTKEKPHKCTECTYASVELTKLRRHMTCHTGERPYQCPHCTYASQDMFKL 422
            ||:.:..|:.|.| .||.|||:.|.||..|..:...|..|...||||:||.|..|..|......|
Human   310 AFSQNMHLIVHQR-THTGEKPYVCPECGRAFSQNMHLTEHQRTHTGEKPYACKECGKAFNKSSSL 373

  Fly   423 KRHMVIHTGEKKYQCDICKSRFTQSNSLKAHKLIHSVVDKPVFQCNYCPTTCGRKADLRVHIKHM 487
            ..|...|||||.|.|..|...|:||:.|..|:..|..| || |:|:.|.....:.:.|..| :.:
Human   374 TLHQRNHTGEKPYVCGECGKAFSQSSYLIQHQRFHIGV-KP-FECSECGKAFSKNSSLTQH-QRI 435

  Fly   488 HTSDVPMTCRRCGQQLPDRYQYKLHVKSHEGEKCYSCKLCSYASVTQRHLASHMLIHLDEKPFHC 552
            ||.:.|..|..|.:....|....:|...|.|||.|.|..|..|.....:|..|..||..|||:.|
Human   436 HTGEKPYECYICKKHFTGRSSLIVHQIVHTGEKPYVCGECGKAFSQSAYLIEHQRIHTGEKPYRC 500

  Fly   553 DQCPQAFRQRQLLRRHMNLVHNEEYQPPEPREKLHKCPSCPREFTHKGNLMRHMETH 609
            .||.::|.:...|..|.. :|.        .||.::|..|.:.|:...||.||:..|
Human   501 GQCGKSFIKNSSLTVHQR-IHT--------GEKPYRCGECGKTFSRNTNLTRHLRIH 548

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CTCFNP_648109.1 23ISL <116..206 CDD:293226 28/122 (23%)
C2H2 Zn finger 296..316 CDD:275368 6/19 (32%)
COG5048 321..>621 CDD:227381 100/289 (35%)
zf-C2H2 322..344 CDD:278523 6/21 (29%)
C2H2 Zn finger 324..344 CDD:275368 6/19 (32%)
zf-H2C2_2 337..361 CDD:290200 10/23 (43%)
C2H2 Zn finger 352..373 CDD:275368 7/20 (35%)
C2H2 Zn finger 381..401 CDD:275368 6/19 (32%)
zf-H2C2_2 394..415 CDD:290200 10/20 (50%)
C2H2 Zn finger 409..429 CDD:275368 5/19 (26%)
zf-H2C2_2 422..446 CDD:290200 11/23 (48%)
C2H2 Zn finger 437..457 CDD:275368 7/19 (37%)
C2H2 Zn finger 467..485 CDD:275368 4/17 (24%)
C2H2 Zn finger 496..516 CDD:275370 4/19 (21%)
C2H2 Zn finger 524..544 CDD:275368 5/19 (26%)
zf-H2C2_2 536..561 CDD:290200 11/24 (46%)
C2H2 Zn finger 552..573 CDD:275368 6/20 (30%)
zf-C2H2 587..609 CDD:278523 7/21 (33%)
C2H2 Zn finger 589..609 CDD:275368 7/19 (37%)
ZNF71NP_001357144.1 KRAB 13..54 CDD:334504 6/27 (22%)
C2H2 Zn finger 168..184 CDD:275368 6/16 (38%)
COG5048 170..544 CDD:227381 119/416 (29%)
C2H2 Zn finger 192..212 CDD:275368 1/19 (5%)
C2H2 Zn finger 220..240 CDD:275368 2/19 (11%)
C2H2 Zn finger 248..268 CDD:275368 6/19 (32%)
C2H2 Zn finger 276..296 CDD:275368 6/19 (32%)
C2H2 Zn finger 304..324 CDD:275368 7/20 (35%)
C2H2 Zn finger 332..352 CDD:275368 6/19 (32%)
C2H2 Zn finger 360..380 CDD:275368 5/19 (26%)
C2H2 Zn finger 388..408 CDD:275368 7/19 (37%)
C2H2 Zn finger 416..436 CDD:275368 4/20 (20%)
C2H2 Zn finger 444..464 CDD:275368 4/19 (21%)
C2H2 Zn finger 472..492 CDD:275368 5/19 (26%)
C2H2 Zn finger 500..520 CDD:275368 6/20 (30%)
C2H2 Zn finger 528..548 CDD:275368 7/19 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
00.000

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