DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CTCF and ZNF624

DIOPT Version :9

Sequence 1:NP_648109.1 Gene:CTCF / 38817 FlyBaseID:FBgn0035769 Length:818 Species:Drosophila melanogaster
Sequence 2:NP_065838.2 Gene:ZNF624 / 57547 HGNCID:29254 Length:865 Species:Homo sapiens


Alignment Length:522 Identity:144/522 - (27%)
Similarity:207/522 - (39%) Gaps:97/522 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   179 VVKVPAPRGRPR---KNPVIPKPEPMDLERE--LEELVD-------------------------E 213
            :.::|.|...|:   |.....|....||.:|  ||:|.:                         |
Human   119 ISRIPYPDMEPKPATKKATRTKAISEDLSQEAILEKLTENGLWDSRMEGLWKWNDRILRLQNNQE 183

  Fly   214 PDISSMVTELSDYTVDEAAVEAATATLTPNEAEVYEFEDNATTEDENADKKDVDFVLSN------ 272
            ..:|..:..|......:......:..:........|......|::||. .::::.:...      
Human   184 NHLSQRIIPLKKTPTSQRGFRFESILIPEPGIATEELHSRCQTQEENF-TENLNLITDTHLGKII 247

  Fly   273 -KEVK-LKTASSTSQ-----NSNASGHKYSCPHCPYTASKKFLITRHSRSHDVEPSFKCSICERS 330
             ||:| .|....||:     .||.....|.|..|......:.|:.:|.|:|..|..::|:.|.::
Human   248 CKEMKGSKAIRQTSELTLGKKSNNKEKPYKCSTCEKAFHYRSLLIQHQRTHTKEKPYECNECGKT 312

  Fly   331 FRSNVGLQNHINTHMGNKPHKCKLCESAFTTSGELVRHTRYKHTKEKPHKCTECTYASVELTKLR 395
            |.....|..|...|.|.||:||..|..||..|..|:.|.|. ||||||::|..|..:..:..:|.
Human   313 FSQPSYLSQHKKIHTGEKPYKCNECGKAFIASSSLMVHQRI-HTKEKPYQCNVCGKSFSQCARLN 376

  Fly   396 RHMTCHTGERPYQCPHCTYASQDMFKLKRHMVIHTGEKKYQCDICKSRFTQSNSLKAHKLIHSVV 460
            :|....|||:||:|..|..|..|..||.||...|.|||.|:||.|...|...:.|..|:..|: .
Human   377 QHQRIQTGEKPYKCSECGKAFSDKSKLARHQETHNGEKPYKCDDCGKAFRNKSYLSVHQKTHT-E 440

  Fly   461 DKPVFQCNYC-----PTT-------------------CGR----KADLRVHIKHMHTSDVPMTCR 497
            :|| :|||.|     .||                   ||:    .:.|.|||: .||.:.|..|.
Human   441 EKP-YQCNECGKSFKNTTIFNVHQRIHTGEKPFRCNECGKAYRSNSSLIVHIR-THTGEKPYECN 503

  Fly   498 RCGQQLPDRYQYKLHVKSHEGEKCYSCKLCSYASVTQRHLASHMLIHLDEKPFHCDQCPQAFRQR 562
            .||:.......:..|.:.|.|||.|.|..|..|.:....|..|..:|..|||:.|.:|.:||.:.
Human   504 ECGKAFNRIANFTEHQRIHTGEKPYKCNECGKAFINYSCLTVHHRMHTGEKPYKCTECGKAFMRS 568

  Fly   563 QLLRRHMNLVHNEE--------------------YQPPEPREKLHKCPSCPREFTHKGNLMRHME 607
            ..|..|.. :|.||                    :|.....||.:||..|.|.||...||..|.:
Human   569 SSLIIHQR-IHTEEKPYLCNECGESFRIKSHLTVHQRIHTGEKPYKCTDCERAFTKMVNLKEHQK 632

  Fly   608 TH 609
            .|
Human   633 IH 634

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CTCFNP_648109.1 23ISL <116..206 CDD:293226 7/29 (24%)
C2H2 Zn finger 296..316 CDD:275368 5/19 (26%)
COG5048 321..>621 CDD:227381 110/337 (33%)
zf-C2H2 322..344 CDD:278523 5/21 (24%)
C2H2 Zn finger 324..344 CDD:275368 5/19 (26%)
zf-H2C2_2 337..361 CDD:290200 11/23 (48%)
C2H2 Zn finger 352..373 CDD:275368 8/20 (40%)
C2H2 Zn finger 381..401 CDD:275368 4/19 (21%)
zf-H2C2_2 394..415 CDD:290200 9/20 (45%)
C2H2 Zn finger 409..429 CDD:275368 8/19 (42%)
zf-H2C2_2 422..446 CDD:290200 12/23 (52%)
C2H2 Zn finger 437..457 CDD:275368 6/19 (32%)
C2H2 Zn finger 467..485 CDD:275368 10/45 (22%)
C2H2 Zn finger 496..516 CDD:275370 4/19 (21%)
C2H2 Zn finger 524..544 CDD:275368 5/19 (26%)
zf-H2C2_2 536..561 CDD:290200 10/24 (42%)
C2H2 Zn finger 552..573 CDD:275368 6/20 (30%)
zf-C2H2 587..609 CDD:278523 9/21 (43%)
C2H2 Zn finger 589..609 CDD:275368 8/19 (42%)
ZNF624NP_065838.2 KRAB 54..114 CDD:214630
KRAB 54..93 CDD:279668
C2H2 Zn finger 254..270 CDD:275368 3/15 (20%)
COG5048 <268..463 CDD:227381 71/197 (36%)
C2H2 Zn finger 278..298 CDD:275368 5/19 (26%)
zf-H2C2_2 291..315 CDD:290200 7/23 (30%)
C2H2 Zn finger 306..326 CDD:275368 5/19 (26%)
zf-H2C2_2 318..341 CDD:290200 9/22 (41%)
C2H2 Zn finger 334..354 CDD:275368 8/20 (40%)
zf-H2C2_2 346..371 CDD:290200 11/25 (44%)
C2H2 Zn finger 362..381 CDD:275368 4/18 (22%)
zf-H2C2_2 375..398 CDD:290200 10/22 (45%)
zf-C2H2 388..410 CDD:278523 9/21 (43%)
C2H2 Zn finger 390..410 CDD:275368 8/19 (42%)
zf-H2C2_2 403..427 CDD:290200 12/23 (52%)
COG5048 414..826 CDD:227381 66/225 (29%)
C2H2 Zn finger 418..438 CDD:275368 6/19 (32%)
zf-H2C2_2 430..455 CDD:290200 9/26 (35%)
C2H2 Zn finger 446..466 CDD:275368 5/19 (26%)
zf-H2C2_2 459..483 CDD:290200 2/23 (9%)
C2H2 Zn finger 474..494 CDD:275368 6/20 (30%)
zf-H2C2_2 486..511 CDD:290200 10/25 (40%)
C2H2 Zn finger 502..522 CDD:275368 4/19 (21%)
zf-H2C2_2 514..537 CDD:290200 8/22 (36%)
C2H2 Zn finger 530..550 CDD:275368 5/19 (26%)
zf-H2C2_2 543..565 CDD:290200 8/21 (38%)
C2H2 Zn finger 558..578 CDD:275368 6/20 (30%)
C2H2 Zn finger 586..606 CDD:275368 1/19 (5%)
zf-H2C2_2 598..622 CDD:290200 7/23 (30%)
C2H2 Zn finger 614..634 CDD:275368 8/19 (42%)
zf-H2C2_2 626..651 CDD:290200 4/9 (44%)
C2H2 Zn finger 642..662 CDD:275368
zf-H2C2_2 654..679 CDD:290200
C2H2 Zn finger 670..690 CDD:275368
zf-H2C2_2 683..707 CDD:290200
C2H2 Zn finger 698..718 CDD:275368
zf-H2C2_2 711..735 CDD:290200
C2H2 Zn finger 726..746 CDD:275368
zf-H2C2_2 738..763 CDD:290200
C2H2 Zn finger 754..774 CDD:275368
C2H2 Zn finger 782..802 CDD:275368
zf-H2C2_2 795..819 CDD:290200
C2H2 Zn finger 810..830 CDD:275368
zf-H2C2_2 822..847 CDD:290200
C2H2 Zn finger 838..858 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.