DRSC/TRiP Functional Genomics Resources

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Protein Alignment CTCF and ZNF107

DIOPT Version :10

Sequence 1:NP_648109.1 Gene:CTCF / 38817 FlyBaseID:FBgn0035769 Length:818 Species:Drosophila melanogaster
Sequence 2:NP_001374954.1 Gene:ZNF107 / 51427 HGNCID:12887 Length:896 Species:Homo sapiens


Alignment Length:465 Identity:129/465 - (27%)
Similarity:178/465 - (38%) Gaps:107/465 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   261 ADKKDVDFVLSNKEVKLKTASST-SQNSNASGHK--------YSCPHCPYTASKKFLITRHSRSH 316
            |.||   .::..|..|.:..... :|.|..:.||        |.|..|....::...:|.|.:.|
Human   430 AHKK---ILMEEKPYKCEECGKVFNQFSTLTRHKIIHTGEKPYKCKECGKAFNQSSNLTEHKKIH 491

  Fly   317 DVEPSFKCSICERSFRSNVGLQNHINTHMGNKPHKCKLCESAFTTSGELVRHTRYKHTKEKPHKC 381
            ..|.|:||..|.::|..:..|.||...:.|.||:||:.|..||..|..|.||.:. ||.|||:||
Human   492 TAEKSYKCEECGKAFNQHSNLINHRKIYSGEKPYKCEECGKAFNRSSTLTRHKKI-HTGEKPYKC 555

  Fly   382 TECTYASVELTKLRRHMTCHTGERPYQCPHCTYASQDMFKLKRHMVIHTGEKKYQCDICKSRFTQ 446
            .||..|..:.:.|..|...||||:||:|..|..|......|.:|..||||||.|:|:.|...|.|
Human   556 EECDRAFSQSSNLTEHKKIHTGEKPYKCEECGKAFNRFSTLTKHKRIHTGEKPYKCEECGKAFNQ 620

  Fly   447 SNSLKAHKLIHS---------------------------VVDKP--------VF----------- 465
            |..|..||::|:                           ..:||        ||           
Human   621 SYQLTRHKIVHTKEKLNKCEEFGKAFKQSSHRTIHKIIHTGEKPYKCEEHGKVFNQSSNLTTQKI 685

  Fly   466 ------------------------------------QCNYCPTTCGRKADLRVHIKHMHTSDVPM 494
                                                :|..|.....|.::|.:| |.:||.:.|.
Human   686 IHTGENLYKFEEHGKAFNLFSNITNHKIIYTGEKPHKCEECGKAYNRFSNLTIH-KRIHTGEKPY 749

  Fly   495 TCRRCGQQLPDRYQYKLHVKSHEGEKCYSCKLCSYASVTQRHLASHMLIHLDEKPFHCDQCPQAF 559
            .|..||:..........|...|.|||.|.||.|..|......|.:|..||..|||:.|::|.:||
Human   750 QCAECGKAFNCSSTLNRHKIIHTGEKPYKCKECGKAFNLSSTLTAHKKIHTGEKPYKCEECGKAF 814

  Fly   560 RQRQLLRRHMNLVHNEEYQPPEPREKLHKCPSCPREFTHKGNLMRH--METHDDSANAREKRRRL 622
            .|...|..|.. :|..        ||.:||..|.:.|....:|..|  :.|.:......:..|..
Human   815 NQSSNLTTHKK-IHTS--------EKPYKCEECGKSFNQFSSLNIHKIIHTGEKPYKCGDYGRAF 870

  Fly   623 KLGRNVRLQK 632
            .|..|:...|
Human   871 NLSSNLTTHK 880

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CTCFNP_648109.1 FAP 116..>202 CDD:429334
C2H2 Zn finger 296..316 CDD:275368 4/19 (21%)
COG5048 321..>621 CDD:227381 109/383 (28%)
C2H2 Zn finger 324..344 CDD:275368 6/19 (32%)
C2H2 Zn finger 352..373 CDD:275368 8/20 (40%)
C2H2 Zn finger 381..401 CDD:275368 6/19 (32%)
zf-H2C2_2 394..415 CDD:463886 10/20 (50%)
C2H2 Zn finger 409..429 CDD:275368 5/19 (26%)
zf-H2C2_2 422..446 CDD:463886 12/23 (52%)
C2H2 Zn finger 437..457 CDD:275368 8/19 (42%)
C2H2 Zn finger 467..485 CDD:275368 5/17 (29%)
C2H2 Zn finger 496..516 CDD:275370 4/19 (21%)
C2H2 Zn finger 524..544 CDD:275368 6/19 (32%)
zf-H2C2_2 536..561 CDD:463886 11/24 (46%)
C2H2 Zn finger 552..573 CDD:275368 7/20 (35%)
zf-C2H2 587..609 CDD:395048 6/23 (26%)
C2H2 Zn finger 589..609 CDD:275368 5/21 (24%)
ZNF107NP_001374954.1 KRAB 48..108 CDD:214630
C2H2 Zn finger 191..211 CDD:275368
C2H2 Zn finger 219..239 CDD:275368
COG5048 243..621 CDD:227381 69/194 (36%)
C2H2 Zn finger 247..267 CDD:275368
C2H2 Zn finger 275..295 CDD:275368
C2H2 Zn finger 303..323 CDD:275368
C2H2 Zn finger 331..351 CDD:275368
C2H2 Zn finger 359..379 CDD:275368
C2H2 Zn finger 387..407 CDD:275368
C2H2 Zn finger 415..435 CDD:275368 3/7 (43%)
C2H2 Zn finger 443..463 CDD:275368 4/19 (21%)
C2H2 Zn finger 471..491 CDD:275368 4/19 (21%)
C2H2 Zn finger 499..519 CDD:275368 6/19 (32%)
C2H2 Zn finger 527..547 CDD:275368 8/20 (40%)
COG5048 551..>863 CDD:227381 86/321 (27%)
C2H2 Zn finger 555..575 CDD:275368 6/19 (32%)
C2H2 Zn finger 583..603 CDD:275368 5/19 (26%)
C2H2 Zn finger 611..631 CDD:275368 8/19 (42%)
C2H2 Zn finger 639..659 CDD:275368 0/19 (0%)
C2H2 Zn finger 699..715 CDD:275368 0/15 (0%)
C2H2 Zn finger 723..743 CDD:275368 6/20 (30%)
C2H2 Zn finger 751..771 CDD:275368 4/19 (21%)
C2H2 Zn finger 779..799 CDD:275368 6/19 (32%)
C2H2 Zn finger 807..827 CDD:275368 7/20 (35%)
C2H2 Zn finger 835..855 CDD:275368 5/19 (26%)
C2H2 Zn finger 863..883 CDD:275368 4/18 (22%)
Blue background indicates that the domain is not in the aligned region.

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