| Sequence 1: | NP_648109.1 | Gene: | CTCF / 38817 | FlyBaseID: | FBgn0035769 | Length: | 818 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_649494.1 | Gene: | CG14655 / 40594 | FlyBaseID: | FBgn0037275 | Length: | 525 | Species: | Drosophila melanogaster |
| Alignment Length: | 376 | Identity: | 85/376 - (22%) |
|---|---|---|---|
| Similarity: | 131/376 - (34%) | Gaps: | 107/376 - (28%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 159 PARAAAAKAKQSAMPPPPALVVKVPAPRGRPRKNPVIPKPEPMDLERELEELVDEPDISSMVTEL 223
Fly 224 SDYTV----DEAAVEAATATLTPNEAEVYEFEDNATTEDENADKKDVDFVLSNKEVKLK------ 278
Fly 279 ---------TASSTSQNSNAS--------------------------------GHKYSCPHCPYT 302
Fly 303 ASKKFLITRHSRSHDVEPS-----------FKCSICERSFRSNVGLQNHINTHMGNKPHKCKLCE 356
Fly 357 SAFTTSGELVRHTRYKHTKEKPHKCTECTYASVELTKLRRHMTCHTGERPYQCPHCTYASQDMFK 421
Fly 422 LKRHMVIHTGEKKYQCDICKSRFTQSNSLKAHKLIHSVVDKPVFQCNYCPT 472 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| CTCF | NP_648109.1 | FAP | 116..>202 | CDD:429334 | 13/42 (31%) |
| C2H2 Zn finger | 296..316 | CDD:275368 | 4/19 (21%) | ||
| COG5048 | 321..>621 | CDD:227381 | 47/163 (29%) | ||
| C2H2 Zn finger | 324..344 | CDD:275368 | 6/19 (32%) | ||
| C2H2 Zn finger | 352..373 | CDD:275368 | 6/20 (30%) | ||
| C2H2 Zn finger | 381..401 | CDD:275368 | 7/19 (37%) | ||
| zf-H2C2_2 | 394..415 | CDD:463886 | 8/20 (40%) | ||
| C2H2 Zn finger | 409..429 | CDD:275368 | 3/19 (16%) | ||
| zf-H2C2_2 | 422..446 | CDD:463886 | 9/23 (39%) | ||
| C2H2 Zn finger | 437..457 | CDD:275368 | 5/19 (26%) | ||
| C2H2 Zn finger | 467..485 | CDD:275368 | 3/6 (50%) | ||
| C2H2 Zn finger | 496..516 | CDD:275370 | |||
| C2H2 Zn finger | 524..544 | CDD:275368 | |||
| zf-H2C2_2 | 536..561 | CDD:463886 | |||
| C2H2 Zn finger | 552..573 | CDD:275368 | |||
| zf-C2H2 | 587..609 | CDD:395048 | |||
| C2H2 Zn finger | 589..609 | CDD:275368 | |||
| CG14655 | NP_649494.1 | SUF4-like | <157..>180 | CDD:411020 | 3/22 (14%) |
| C2H2 Zn finger | 159..180 | CDD:411020 | 3/20 (15%) | ||
| SFP1 | <264..345 | CDD:227516 | 26/81 (32%) | ||
| C2H2 Zn finger | 268..288 | CDD:275368 | 6/19 (32%) | ||
| C2H2 Zn finger | 324..344 | CDD:275368 | 7/19 (37%) | ||
| zf-H2C2_2 | 340..361 | CDD:463886 | 7/20 (35%) | ||
| C2H2 Zn finger | 352..372 | CDD:275368 | 3/19 (16%) | ||
| zf-H2C2_2 | 368..389 | CDD:463886 | 9/20 (45%) | ||
| C2H2 Zn finger | 380..396 | CDD:275368 | 4/15 (27%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||