Sequence 1: | NP_648109.1 | Gene: | CTCF / 38817 | FlyBaseID: | FBgn0035769 | Length: | 818 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001178800.1 | Gene: | Zbtb40 / 362635 | RGDID: | 1309866 | Length: | 1255 | Species: | Rattus norvegicus |
Alignment Length: | 612 | Identity: | 142/612 - (23%) |
---|---|---|---|
Similarity: | 214/612 - (34%) | Gaps: | 173/612 - (28%) |
- Green bases have known domain annotations that are detailed below.
Fly 51 NGAEAGGSKPMEEAEADLDHAEEAEEEEEDDEDKYFIDDEGNCYIKTTPKKQKELQKKLKQAAAK 115
Fly 116 PGKATRSVVSTATNKSINLRPAKSTPKATTSKPPPEPKAISVRPARAAAAKAKQSAMPPPPALVV 180
Fly 181 KVPAPRGRPRKNPVIPKPEPMDLERELEELVDEPDISSMVTELSDYTVDEAAVEAATATLTPNEA 245
Fly 246 EVYEFEDNATTEDENADKKDVDFVLSNKEVKLKTASSTSQNSNASGHKYSCPHCPYTASKKFLIT 310
Fly 311 RHSRSHDVEPSFKCSICERSFRSNVGLQNHINTHMGNKPHKCKLCESAFTTSGELVRHTRYKHTK 375
Fly 376 EKPHKCTECTYASVELTKLRRHMTCHTGERPYQCPHCTYASQDMFKLKRHM-VIHTG-EKKYQCD 438
Fly 439 ICKSRFTQSNSLKAH-KLIHSVVDKPVFQCNYC---------------------PTTCG------ 475
Fly 476 -RKADLRVHIKHMHTSDV------------PMTCRRCGQQLPDRYQYKLHVKS-HEGEKCYSCKL 526
Fly 527 CSYASVTQRHLASHMLI-HLDEKPFHCDQCPQAFRQRQLLRRHMNLVHNEEYQPPEPREKLHKCP 590
Fly 591 SCPREFTHKGNLMRHMETHDDSANARE 617 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CTCF | NP_648109.1 | 23ISL | <116..206 | CDD:293226 | 16/89 (18%) |
C2H2 Zn finger | 296..316 | CDD:275368 | 2/19 (11%) | ||
COG5048 | 321..>621 | CDD:227381 | 91/342 (27%) | ||
zf-C2H2 | 322..344 | CDD:278523 | 8/21 (38%) | ||
C2H2 Zn finger | 324..344 | CDD:275368 | 7/19 (37%) | ||
zf-H2C2_2 | 337..361 | CDD:290200 | 10/23 (43%) | ||
C2H2 Zn finger | 352..373 | CDD:275368 | 8/20 (40%) | ||
C2H2 Zn finger | 381..401 | CDD:275368 | 5/19 (26%) | ||
zf-H2C2_2 | 394..415 | CDD:290200 | 10/20 (50%) | ||
C2H2 Zn finger | 409..429 | CDD:275368 | 4/20 (20%) | ||
zf-H2C2_2 | 422..446 | CDD:290200 | 9/25 (36%) | ||
C2H2 Zn finger | 437..457 | CDD:275368 | 6/20 (30%) | ||
C2H2 Zn finger | 467..485 | CDD:275368 | 7/45 (16%) | ||
C2H2 Zn finger | 496..516 | CDD:275370 | 5/20 (25%) | ||
C2H2 Zn finger | 524..544 | CDD:275368 | 5/20 (25%) | ||
zf-H2C2_2 | 536..561 | CDD:290200 | 8/25 (32%) | ||
C2H2 Zn finger | 552..573 | CDD:275368 | 6/20 (30%) | ||
zf-C2H2 | 587..609 | CDD:278523 | 7/21 (33%) | ||
C2H2 Zn finger | 589..609 | CDD:275368 | 7/19 (37%) | ||
Zbtb40 | NP_001178800.1 | BTB_POZ_ZBTB40 | 1..116 | CDD:349534 | |
C2H2 Zn finger | 824..845 | CDD:275368 | 5/32 (16%) | ||
C2H2 Zn finger | 853..873 | CDD:275368 | 7/19 (37%) | ||
COG5048 | <869..1122 | CDD:227381 | 68/256 (27%) | ||
C2H2 Zn finger | 881..930 | CDD:275368 | 16/48 (33%) | ||
C2H2 Zn finger | 938..957 | CDD:275368 | 4/18 (22%) | ||
C2H2 Zn finger | 968..986 | CDD:275370 | 6/20 (30%) | ||
C2H2 Zn finger | 1024..1044 | CDD:275368 | 4/20 (20%) | ||
C2H2 Zn finger | 1064..1083 | CDD:275368 | 4/18 (22%) | ||
C2H2 Zn finger | 1093..1114 | CDD:275368 | 5/20 (25%) | ||
zf-Di19 | 1120..1174 | CDD:398954 | 16/59 (27%) | ||
C2H2 Zn finger | 1122..1141 | CDD:275368 | 6/18 (33%) | ||
C2H2 Zn finger | 1153..1170 | CDD:275368 | 5/16 (31%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
0 | 0.000 |