| Sequence 1: | NP_648109.1 | Gene: | CTCF / 38817 | FlyBaseID: | FBgn0035769 | Length: | 818 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_609951.2 | Gene: | CG17568 / 35198 | FlyBaseID: | FBgn0032763 | Length: | 513 | Species: | Drosophila melanogaster |
| Alignment Length: | 554 | Identity: | 118/554 - (21%) |
|---|---|---|---|
| Similarity: | 204/554 - (36%) | Gaps: | 125/554 - (22%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 3 RRTKKDEDPEDLQTFLNNFHKEIEGNSDEKVVNTI---------LE------------AISAEAI 46
Fly 47 DLDENGAEAGGSKPMEEAEADLDHAEEAEEEEED----DEDKYFIDDEGNCYIKTTPKKQKELQK 107
Fly 108 KLKQAAAKPGKATRSVVSTATNKSINLRPA---KSTPKATTSKPPPEPKAISVRPARAAAAKAKQ 169
Fly 170 SAMPPPPALVVKVPAPRGRPRKNPVIPKPE-----PMDLERELEELVDEPDISSMVTELSDYTVD 229
Fly 230 EAAVEAATATLTPNEAEVYEFEDNATTEDENADKKDVDFVLSNKEVKLKTASSTSQNS------- 287
Fly 288 NASGHKYSCPHCPYTASKKFLITRH--SRSHDVEPSFK-------CSICERSFRSNVGLQNH-IN 342
Fly 343 THMGNKPHKCKLCESAFTTSGELVRHTRYKHTKEKPHKCTECTYASVELTKLRRHMTCHTGERPY 407
Fly 408 QCPHCTYASQDMFKLKRHMVIHTGEKKYQCDICKSRFTQSNSLKAHKLIHSVVDKPVFQCNYCPT 472
Fly 473 TCGRKADLRVHIKHMHTSDVPMTCRRCGQQLPDR 506 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| CTCF | NP_648109.1 | 23ISL | <116..206 | CDD:293226 | 19/97 (20%) |
| C2H2 Zn finger | 296..316 | CDD:275368 | 3/21 (14%) | ||
| COG5048 | 321..>621 | CDD:227381 | 57/194 (29%) | ||
| zf-C2H2 | 322..344 | CDD:278523 | 7/29 (24%) | ||
| C2H2 Zn finger | 324..344 | CDD:275368 | 6/20 (30%) | ||
| zf-H2C2_2 | 337..361 | CDD:290200 | 7/24 (29%) | ||
| C2H2 Zn finger | 352..373 | CDD:275368 | 5/20 (25%) | ||
| C2H2 Zn finger | 381..401 | CDD:275368 | 5/19 (26%) | ||
| zf-H2C2_2 | 394..415 | CDD:290200 | 6/20 (30%) | ||
| C2H2 Zn finger | 409..429 | CDD:275368 | 5/19 (26%) | ||
| zf-H2C2_2 | 422..446 | CDD:290200 | 9/23 (39%) | ||
| C2H2 Zn finger | 437..457 | CDD:275368 | 9/19 (47%) | ||
| C2H2 Zn finger | 467..485 | CDD:275368 | 7/17 (41%) | ||
| C2H2 Zn finger | 496..516 | CDD:275370 | 4/11 (36%) | ||
| C2H2 Zn finger | 524..544 | CDD:275368 | |||
| zf-H2C2_2 | 536..561 | CDD:290200 | |||
| C2H2 Zn finger | 552..573 | CDD:275368 | |||
| zf-C2H2 | 587..609 | CDD:278523 | |||
| C2H2 Zn finger | 589..609 | CDD:275368 | |||
| CG17568 | NP_609951.2 | zf-AD | 10..87 | CDD:214871 | 14/83 (17%) |
| COG5048 | <313..471 | CDD:227381 | 49/161 (30%) | ||
| C2H2 Zn finger | 314..335 | CDD:275368 | 6/20 (30%) | ||
| C2H2 Zn finger | 343..363 | CDD:275368 | 5/20 (25%) | ||
| C2H2 Zn finger | 371..391 | CDD:275368 | 5/19 (26%) | ||
| C2H2 Zn finger | 398..418 | CDD:275368 | 5/19 (26%) | ||
| C2H2 Zn finger | 426..446 | CDD:275368 | 9/19 (47%) | ||
| zf-H2C2_2 | 439..463 | CDD:290200 | 10/25 (40%) | ||
| C2H2 Zn finger | 454..475 | CDD:275368 | 7/20 (35%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 1 | 1.100 | - | - | P | PTHR24390 |
| Phylome | 0 | 0.000 | Not matched by this tool. | |||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| 1 | 1.100 | |||||