DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CTCF and ZNF530

DIOPT Version :9

Sequence 1:NP_648109.1 Gene:CTCF / 38817 FlyBaseID:FBgn0035769 Length:818 Species:Drosophila melanogaster
Sequence 2:NP_065931.3 Gene:ZNF530 / 348327 HGNCID:29297 Length:599 Species:Homo sapiens


Alignment Length:367 Identity:110/367 - (29%)
Similarity:172/367 - (46%) Gaps:27/367 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   251 EDNATTEDENADKKDVDFVLSNKEVKLKTASSTSQNSNASGHK--------YSCPHCPYTASKKF 307
            |.:...:.:.||..:..:..|      :...|.||:|....|:        :.|..|..:.|:|.
Human   222 EKSVFIQHQRADSGERPYKCS------ECGKSFSQSSGFLRHRKAHGRTRTHECSECGKSFSRKT 280

  Fly   308 LITRHSRSHDVEPSFKCSICERSFRSNVGLQNHINTHMGNKPHKCKLCESAFTTSGELVRHTRYK 372
            .:|:|.|.|..|..:.||.|.:|||....|..|...|.|.:|::|..|..:|:.|..|.|| |..
Human   281 HLTQHQRVHTGERPYDCSECGKSFRQVSVLIQHQRVHTGERPYECSECGKSFSHSTNLYRH-RSA 344

  Fly   373 HTKEKPHKCTECTYASVELTKLRRHMTCHTGERPYQCPHCTYASQDMFKLKRHMVIHTGEKKYQC 437
            ||..:|::|:||..:....|.|.||...|||.|||:|..|..|......|..|...||||:.|.|
Human   345 HTSTRPYECSECGKSFSHSTNLFRHWRVHTGVRPYECSECGKAFSCNIYLIHHQRFHTGERPYVC 409

  Fly   438 DICKSRFTQSNSLKAHKLIHSVVDKPVFQCNYCPTTCGRKADLRVHIKHMHTSDVPMTCRRCGQQ 502
            ..|...|.|.:.|..|:.:|: .::| ::|:.|.....:.:.|..| :..||...|..|..|.:.
Human   410 SECGKSFGQKSVLIQHQRVHT-GERP-YECSECGKVFSQSSGLFRH-RRAHTKTKPYECSECEKS 471

  Fly   503 LPDRYQYKLHVKSHEGEKCYSCKLCSYASVTQRHLASHMLIHLDEKPFHCDQCPQAFRQRQLLRR 567
            ...:.....|...|.||:.|.|.:|..:.:.:.||..|..:|.:|:|:.||:|.:::.|...|.:
Human   472 FSCKTDLIRHQTVHTGERPYECSVCGKSFIRKTHLIRHQTVHTNERPYECDECGKSYSQSSALLQ 536

  Fly   568 HMNLVHNEEYQPPEPREKLHKCPSCPREFTHKGNLMRHMETH 609
            |.. ||.        .|:.::|..|.:.||.|.:|::|...|
Human   537 HRR-VHT--------GERPYECRECGKSFTRKNHLIQHKTVH 569

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CTCFNP_648109.1 23ISL <116..206 CDD:293226
C2H2 Zn finger 296..316 CDD:275368 7/19 (37%)
COG5048 321..>621 CDD:227381 92/289 (32%)
zf-C2H2 322..344 CDD:278523 8/21 (38%)
C2H2 Zn finger 324..344 CDD:275368 8/19 (42%)
zf-H2C2_2 337..361 CDD:290200 8/23 (35%)
C2H2 Zn finger 352..373 CDD:275368 8/20 (40%)
C2H2 Zn finger 381..401 CDD:275368 7/19 (37%)
zf-H2C2_2 394..415 CDD:290200 11/20 (55%)
C2H2 Zn finger 409..429 CDD:275368 5/19 (26%)
zf-H2C2_2 422..446 CDD:290200 10/23 (43%)
C2H2 Zn finger 437..457 CDD:275368 6/19 (32%)
C2H2 Zn finger 467..485 CDD:275368 4/17 (24%)
C2H2 Zn finger 496..516 CDD:275370 3/19 (16%)
C2H2 Zn finger 524..544 CDD:275368 5/19 (26%)
zf-H2C2_2 536..561 CDD:290200 9/24 (38%)
C2H2 Zn finger 552..573 CDD:275368 6/20 (30%)
zf-C2H2 587..609 CDD:278523 7/21 (33%)
C2H2 Zn finger 589..609 CDD:275368 7/19 (37%)
ZNF530NP_065931.3 KRAB 14..>55 CDD:214630
KRAB 14..53 CDD:279668
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 68..88
C2H2 Zn finger 213..233 CDD:275368 1/10 (10%)
C2H2 Zn finger 241..261 CDD:275368 6/25 (24%)
COG5048 264..598 CDD:227381 101/319 (32%)
zf-C2H2 267..289 CDD:278523 7/21 (33%)
C2H2 Zn finger 269..289 CDD:275368 7/19 (37%)
zf-H2C2_2 281..306 CDD:290200 10/24 (42%)
C2H2 Zn finger 297..317 CDD:275368 8/19 (42%)
zf-H2C2_2 310..334 CDD:290200 8/23 (35%)
C2H2 Zn finger 325..345 CDD:275368 8/20 (40%)
zf-C2H2 351..373 CDD:278523 7/21 (33%)
C2H2 Zn finger 353..373 CDD:275368 7/19 (37%)
C2H2 Zn finger 381..401 CDD:275368 5/19 (26%)
zf-H2C2_2 397..416 CDD:290200 8/18 (44%)
C2H2 Zn finger 409..429 CDD:275368 6/19 (32%)
zf-H2C2_2 422..446 CDD:290200 6/25 (24%)
C2H2 Zn finger 437..457 CDD:275368 4/20 (20%)
C2H2 Zn finger 465..485 CDD:275368 3/19 (16%)
zf-H2C2_2 477..502 CDD:290200 7/24 (29%)
C2H2 Zn finger 493..513 CDD:275368 5/19 (26%)
zf-H2C2_2 505..530 CDD:290200 9/24 (38%)
C2H2 Zn finger 521..541 CDD:275368 6/20 (30%)
zf-H2C2_2 533..558 CDD:290200 8/33 (24%)
C2H2 Zn finger 549..569 CDD:275368 7/19 (37%)
zf-H2C2_2 561..586 CDD:290200 3/9 (33%)
C2H2 Zn finger 577..597 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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