Sequence 1: | NP_648109.1 | Gene: | CTCF / 38817 | FlyBaseID: | FBgn0035769 | Length: | 818 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_608840.1 | Gene: | CG15436 / 33657 | FlyBaseID: | FBgn0031610 | Length: | 346 | Species: | Drosophila melanogaster |
Alignment Length: | 347 | Identity: | 98/347 - (28%) |
---|---|---|---|
Similarity: | 144/347 - (41%) | Gaps: | 84/347 - (24%) |
- Green bases have known domain annotations that are detailed below.
Fly 229 DEAAVEAATATLTPNEAEVYEFEDNATTEDENADKKDVDFVLSNKEVKLKTASSTSQNSNASGHK 293
Fly 294 --YSCPHCPYTASKKFLITRHSRSHDVEPSFKCSICERSFRSNVGLQNHINTHMGNKPHKCKLCE 356
Fly 357 SAFTTSGELVRHTRYKHTKEKPHKCTECTYASVELTKLRRHMTCHTGERPYQCPHCTYASQDMFK 421
Fly 422 LKRHMVIHTGEKKYQCDICKSRFTQSNSLKAHKLIHSVVDKPVFQCNYCPTTCGRKADLRVHIKH 486
Fly 487 MHTSDVPMTCRRCGQQLPDRYQYKLHVKSHEGEKCYSCKLCSYASVTQRHLASHMLIHLDEKPFH 551
Fly 552 CDQCPQAFRQRQLLRRHMNLVH 573 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CTCF | NP_648109.1 | 23ISL | <116..206 | CDD:293226 | |
C2H2 Zn finger | 296..316 | CDD:275368 | 6/19 (32%) | ||
COG5048 | 321..>621 | CDD:227381 | 76/253 (30%) | ||
zf-C2H2 | 322..344 | CDD:278523 | 9/21 (43%) | ||
C2H2 Zn finger | 324..344 | CDD:275368 | 8/19 (42%) | ||
zf-H2C2_2 | 337..361 | CDD:290200 | 9/23 (39%) | ||
C2H2 Zn finger | 352..373 | CDD:275368 | 6/20 (30%) | ||
C2H2 Zn finger | 381..401 | CDD:275368 | 6/19 (32%) | ||
zf-H2C2_2 | 394..415 | CDD:290200 | 11/20 (55%) | ||
C2H2 Zn finger | 409..429 | CDD:275368 | 6/19 (32%) | ||
zf-H2C2_2 | 422..446 | CDD:290200 | 9/23 (39%) | ||
C2H2 Zn finger | 437..457 | CDD:275368 | 6/19 (32%) | ||
C2H2 Zn finger | 467..485 | CDD:275368 | 4/17 (24%) | ||
C2H2 Zn finger | 496..516 | CDD:275370 | 1/19 (5%) | ||
C2H2 Zn finger | 524..544 | CDD:275368 | 5/19 (26%) | ||
zf-H2C2_2 | 536..561 | CDD:290200 | 8/24 (33%) | ||
C2H2 Zn finger | 552..573 | CDD:275368 | 7/20 (35%) | ||
zf-C2H2 | 587..609 | CDD:278523 | |||
C2H2 Zn finger | 589..609 | CDD:275368 | |||
CG15436 | NP_608840.1 | zf-AD | 4..78 | CDD:285071 | |
C2H2 Zn finger | 128..148 | CDD:275368 | 6/19 (32%) | ||
C2H2 Zn finger | 156..176 | CDD:275368 | 8/19 (42%) | ||
COG5048 | <180..341 | CDD:227381 | 62/220 (28%) | ||
C2H2 Zn finger | 184..204 | CDD:275368 | 6/20 (30%) | ||
zf-H2C2_2 | 197..219 | CDD:290200 | 10/22 (45%) | ||
C2H2 Zn finger | 212..232 | CDD:275368 | 6/19 (32%) | ||
zf-H2C2_2 | 224..249 | CDD:290200 | 11/24 (46%) | ||
C2H2 Zn finger | 240..260 | CDD:275368 | 6/19 (32%) | ||
zf-H2C2_2 | 252..276 | CDD:290200 | 8/23 (35%) | ||
C2H2 Zn finger | 268..288 | CDD:275368 | 6/19 (32%) | ||
C2H2 Zn finger | 296..316 | CDD:275368 | 10/76 (13%) | ||
C2H2 Zn finger | 324..341 | CDD:275368 | 6/16 (38%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | P | PTHR24390 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.100 |