| Sequence 1: | NP_648109.1 | Gene: | CTCF / 38817 | FlyBaseID: | FBgn0035769 | Length: | 818 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_573065.1 | Gene: | CG8944 / 32517 | FlyBaseID: | FBgn0030680 | Length: | 762 | Species: | Drosophila melanogaster |
| Alignment Length: | 303 | Identity: | 67/303 - (22%) |
|---|---|---|---|
| Similarity: | 107/303 - (35%) | Gaps: | 60/303 - (19%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 294 YSCPHCPYTASKKFLITRHSRSHDVEPS----FKCSICERSFRSNVGLQNHINTHMGNKPH---K 351
Fly 352 CKLCESAFTTSGELVRHTRYKHTKE-------KPHKCTECTYASVELTKLRRHMTCHTGERPYQC 409
Fly 410 PHCTYASQDMFKLKRHMVIHTG----------EKKYQCDICKSRFTQSNSLKAHKLIHSVVDKPV 464
Fly 465 FQCNYCPTTCGRKADLRVHIKHMHTSDVPMTCRRCGQQLPDRYQYKLHVKSHEGEKCYSCKLCSY 529
Fly 530 ASVTQRHLASHMLIHLDEKPFHCDQCPQAFRQRQLL----RRH 568 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| CTCF | NP_648109.1 | 23ISL | <116..206 | CDD:293226 | |
| C2H2 Zn finger | 296..316 | CDD:275368 | 5/19 (26%) | ||
| COG5048 | 321..>621 | CDD:227381 | 60/276 (22%) | ||
| zf-C2H2 | 322..344 | CDD:278523 | 6/21 (29%) | ||
| C2H2 Zn finger | 324..344 | CDD:275368 | 6/19 (32%) | ||
| zf-H2C2_2 | 337..361 | CDD:290200 | 8/26 (31%) | ||
| C2H2 Zn finger | 352..373 | CDD:275368 | 6/20 (30%) | ||
| C2H2 Zn finger | 381..401 | CDD:275368 | 2/19 (11%) | ||
| zf-H2C2_2 | 394..415 | CDD:290200 | 3/20 (15%) | ||
| C2H2 Zn finger | 409..429 | CDD:275368 | 4/19 (21%) | ||
| zf-H2C2_2 | 422..446 | CDD:290200 | 7/33 (21%) | ||
| C2H2 Zn finger | 437..457 | CDD:275368 | 7/19 (37%) | ||
| C2H2 Zn finger | 467..485 | CDD:275368 | 2/17 (12%) | ||
| C2H2 Zn finger | 496..516 | CDD:275370 | 4/19 (21%) | ||
| C2H2 Zn finger | 524..544 | CDD:275368 | 4/19 (21%) | ||
| zf-H2C2_2 | 536..561 | CDD:290200 | 9/24 (38%) | ||
| C2H2 Zn finger | 552..573 | CDD:275368 | 9/21 (43%) | ||
| zf-C2H2 | 587..609 | CDD:278523 | |||
| C2H2 Zn finger | 589..609 | CDD:275368 | |||
| CG8944 | NP_573065.1 | MADF_DNA_bdg | 259..344 | CDD:287510 | |
| MADF | 379..472 | CDD:214738 | |||
| C2H2 Zn finger | 476..496 | CDD:275368 | 5/19 (26%) | ||
| C2H2 Zn finger | 506..526 | CDD:275368 | 6/19 (32%) | ||
| C2H2 Zn finger | 537..557 | CDD:275368 | 6/20 (30%) | ||
| C2H2 Zn finger | 636..656 | CDD:275368 | 7/19 (37%) | ||
| zf-C2H2_8 | 639..712 | CDD:292531 | 16/99 (16%) | ||
| C2H2 Zn finger | 666..688 | CDD:275368 | 6/48 (13%) | ||
| zf-C2H2 | 694..716 | CDD:278523 | 4/21 (19%) | ||
| C2H2 Zn finger | 696..716 | CDD:275368 | 4/19 (21%) | ||
| zf-H2C2_2 | 708..733 | CDD:290200 | 9/24 (38%) | ||
| C2H2 Zn finger | 724..744 | CDD:275368 | 7/19 (37%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 1 | 1.100 | - | - | P | PTHR24390 |
| Phylome | 0 | 0.000 | Not matched by this tool. | |||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| 1 | 1.100 | |||||